Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00569 AGAGGGTCAACGACGACGTTTACTATATTAATTGTTGCAGAGGAAGGTGGTGATTATATTGTGAATGCTTTTGGTTTGGGAATTAAGTCGGAAGACATGGCGATAGGTGAAGAAAGACAAGAATCACAATCACAATCAGAAGGAAAAGTGTGGAATTTGTTGAAGCTTCCCTTTCGCCATTCAACTGCTTCAACCTCCAATTCCGTTTCTTCTCTTGCCAGATCGCTCCTCCCCACACGACGTCGTCTCAAGCTCGATCCTTCCAACAAGCTCTACTTCCCTTATGAACCGGGCAAGCAGGCTAAGAGTGCCATCAGGATTAAAAACACCAGCAAATCCAATGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGCTGTTTCATGCGCCCTCCAGGGGGCGTACTAACACCTGGCGAGAGTATAGTAGCGATTGTGTTCAAGTTTGTAGAGCCTCCACAGAATAATGAAAAGCCAGAAAAAACTGGACTCAAATTTAAAATCATGAGCATGAAGGTCAAAGGAACAATTGATTATGTACCTGAAATGTTTGGTGAGCTGAAGGATCAAGTAACAGTCGAGCAGATTTTGCAGGTTGTTTTTCTGGATCCAGAGCGTAATAGCCCTGCTTTGGAAAAACTAAGGCTTCAGCTAGCTGAGGCTAATGCTGCAGCTGAGGCACGTAAGAGAGCCCCAGAAGATGCAGGTCCTAAGATTCTCGGAGAAGGGCTTGTTATAGATGAATGGAAAGAGAGGAGGGAAAGATACCTGGCAAAGCAGCAGAGTGAAATGGTAATGGACTCTATATAG 810 0.4432 RGSTTTFTILIVAEEGGDYIVNAFGLGIKSEDMAIGEERQESQSQSEGKVWNLLKLPFRHSTASTSNSVSSLARSLLPTRRRLKLDPSNKLYFPYEPGKQAKSAIRIKNTSKSNVAFKFQTNAPKSCFMRPPGGVLTPGESIVAIVFKFVEPPQNNEKPEKTGLKFKIMSMKVKGTIDYVPEMFGELKDQVTVEQILQVVFLDPERNSPALEKLRLQLAEANAAAEARKRAPEDAGPKILGEGLVIDEWKERRERYLAKQQSEMVMDSI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00569 269 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 81 262 IPR016763 GO:0005789
Vimu2g00569 269 ProSiteProfiles Major sperm protein (MSP) domain profile. 82 202 IPR000535 -
Vimu2g00569 269 SUPERFAMILY PapD-like 72 210 IPR008962 -
Vimu2g00569 269 Coils Coil 211 231 - -
Vimu2g00569 269 Gene3D Immunoglobulins 78 206 IPR013783 -
Vimu2g00569 269 Pfam MSP (Major sperm protein) domain 83 191 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00569 Vimu-Chr2 3306203 3308856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00569 - - gmx:100786563 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00569 2 3306203 3308856 Vimu2g00569 2 3306203 3308856 ECH
Vimu11g03496 11 56297806 56301973 Vimu2g00569 2 3306203 3308856 PCT