Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03496 CATATCTGCGCGATTACCGTTTCCGGAACCGGAGAGGACGAGAGCATGGCCGTAGCTGATCCCAAGCCTCACTCCGAACCCAAGGTCTGGAACTTCTTCAAGCTTCCCTTTCGCCATTCCACCTCTGCCACCTCTACGACTTCGTCTTCTGCTAACCTTCACCTCCATCACCACCATCACCACCACAACCCTAACAATCTTCCCCTCGAGGGCTCCACCTCCCATACCTCCAATTCCGTTTCCTCCGTCGCCAGATCGCTTCTCCCAACACGACGTCGTCTCAAGCTCGATCCCTCCAATAAGCTTTACTTCCCCTATGAGCCGGGCAAACAGGTTAGGAGTGCCATCAGGATTAAAAACACCAGTAAATCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAAAGCTGTTTCATGCGTCCTCCTGGAGCCATCCTTGCCCCTGGTGAGAGTATCATAGCCACAGTGTTTAAGTTTGTAGAGCAACCAGAAAATAATGAAAAGCCTGAGAAAACTGGACTCAAATTTAAAATCATGAGCTTGAAGGTGAAAGGATCAATTGATTACGTCCCTGAACTGTTTGATGAGCAGAAGGACCAAGTAGCAGTGGAGCAGATTCTGCGAGTTGTTTTTCTAGATCCAGAGCGTCCTTGTCCTGCTTTGGAAAAACTGAACCGACAACTAGCTGATGCGGATGCTGCCCTTGAGGCACGTAAGAAACCTGTGGAAGATGCAGGTCCAAAAATTATCGGGGAAGGGCTCGTCATAGACGAATGGAAAGAGAGGAGAGAAAGATACCTCGCAAAGCAGCAGGGTGAAGTGGTTGTAGATTCTGTATAG 843 0.4887 HICAITVSGTGEDESMAVADPKPHSEPKVWNFFKLPFRHSTSATSTTSSSANLHLHHHHHHHNPNNLPLEGSTSHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKPEKTGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPCPALEKLNRQLADADAALEARKKPVEDAGPKIIGEGLVIDEWKERRERYLAKQQGEVVVDSV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03496 280 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 92 271 IPR016763 GO:0005789
Vimu11g03496 280 MobiDBLite consensus disorder prediction 43 85 - -
Vimu11g03496 280 Pfam MSP (Major sperm protein) domain 94 203 IPR000535 -
Vimu11g03496 280 SUPERFAMILY PapD-like 82 221 IPR008962 -
Vimu11g03496 280 Gene3D Immunoglobulins 89 217 IPR013783 -
Vimu11g03496 280 MobiDBLite consensus disorder prediction 66 85 - -
Vimu11g03496 280 ProSiteProfiles Major sperm protein (MSP) domain profile. 93 213 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03496 Vimu-Chr11 56297806 56301973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03496 - - gmx:100808835 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03496 11 56297806 56301973 Vimu2g00569 2 3306203 3308856 PCT