Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00484 ATGCATGAGACAGACGACAATAGAGCAAGAACAAAGTTTTTCTTTTTTGCACACTTATGCAGTATTTTGTGGTACGTGGTCCCTGGATACTTGTTCACAACGCTCACAAATATCTCATGGGTGTGTTGGATATTCTCCAAGTCAGTTACAGCTCAGCAGATAGGGTCAGGCATGAGGGGGCTTGGAGTTGGAGCCTTCACACTTGATTGGGCTGTTGTGGCATCATTCTTGTTCAGCCCTCTTATATCACCCTTCTATGTCATTGTCAATGTTTTTGTGGGGTATGCATTAATAGTGTATGTTGTTATTCCTATAGCATATTGGGGCCTCAATGTGTACAATGCCAATATGTTTCCCATTTTCTCCACACAATTGTTTACAGCCCAAGGTCAAAGGTACAACGTATCTGCCATTATAAACAATCATTTTGAGTTTAATGTTGCAGAGTATGAAAAGCAAGGTAGAATTCATCTCAGTATGTTTTTCGCCCTCAGTTATTTTGGCTTTGGATTTGCCACCGTAGCATCCACCGTCACACATGTCTTCTGCTTCCATGGAAGGTAA 564 0.4149 MHETDDNRARTKFFFFAHLCSILWYVVPGYLFTTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGAFTLDWAVVASFLFSPLISPFYVIVNVFVGYALIVYVVIPIAYWGLNVYNANMFPIFSTQLFTAQGQRYNVSAIINNHFEFNVAEYEKQGRIHLSMFFALSYFGFGFATVASTVTHVFCFHGR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00484 187 Pfam OPT oligopeptide transporter protein 2 187 IPR004813 GO:0035673
Vimu2g00484 187 PANTHER ISP4 LIKE PROTEIN 2 187 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00484 Vimu-Chr2 2770507 2771070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00484 1 187 Organic Solute Cotransporters AT5G64410 67.021 1.43e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00484 - - gmx:100811348 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03402 11 55083458 55086541 Vimu2g00484 2 2770507 2771070 PCT