Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00462 ATGATGGAGGAGAAGACGGAGAAGGTGAAGGGTGAGGCGCTGCAGATAATCGAAGCTTTTGAGGTTCTGCCAAAGCTCGTGGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGTGAAATGCCCTCTCTCTATCCTCACGCCAAAGGCATATTGTTAGCGCTCAAAGAGAAAGGCATCGACGTTGCAATCGCTTCTCGCTCACCAACCGCTGACATAGCAACAGCTTTCCTCAACAAATTGGACCTCTCCTCACTCTTCGTCGCACAGGAAATATATTCCAGTTGGACACATAAAACAGATCATTTCCAGAGGATTCATTCGAGAACCGCTGTCCCCTTCAACTCCATGCTCTTTTTCGATGATGAGAATAGAAACATCCAATCGGTCTCTAAAATGGGAGTAACTAGCATTTTGGTTGGAGATGGGGTAAATCTTGGGTCGTTAAGGGAAGGTCTTATTCAATTCTCTCGAAACTGGAACGCTTCACAGAAGAACAAACAGAAATGGCTTTCCAAGTACTCGAACAAGCCAGATTCTTCCAACCCCGCTGTATGA 579 0.4611 MMEEKTEKVKGEALQIIEAFEVLPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGILLALKEKGIDVAIASRSPTADIATAFLNKLDLSSLFVAQEIYSSWTHKTDHFQRIHSRTAVPFNSMLFFDDENRNIQSVSKMGVTSILVGDGVNLGSLREGLIQFSRNWNASQKNKQKWLSKYSNKPDSSNPAV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00462 192 FunFam Magnesium-dependent phosphatase 1 9 169 - -
Vimu2g00462 192 SUPERFAMILY HAD-like 24 154 IPR036412 -
Vimu2g00462 192 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 4 173 IPR010036 GO:0016791
Vimu2g00462 192 NCBIfam HAD-IIIC family phosphatase 25 140 IPR010033 -
Vimu2g00462 192 SFLD C1.5.2: MDP Like 6 172 - -
Vimu2g00462 192 Gene3D - 5 170 IPR023214 -
Vimu2g00462 192 Pfam Acid Phosphatase 23 165 IPR010036 GO:0016791
Vimu2g00462 192 CDD HAD_MDP-1_like 24 147 IPR035679 -
Vimu2g00462 192 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 6 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00462 Vimu-Chr2 2633109 2633936 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00462 K17619 - gmx:100305763 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03335 11 53934146 53936117 Vimu2g00462 2 2633109 2633936 PCT