Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03335 ATGGAAGAGGTGGAGCAGGTCAAAGCAGAGGCATTGCAGATAATGGGAGTTTTTCAACTGCTTCCGAAGCTCGTCGTCTTCGATCTCGATTACACTCTTTGGCCTTTCTACTGTGAGTGCCGCTCGAAGCACGATACGCCTTATTTGTTTCCTCATTCTAGAGGCATTTTGCATGCGCTCAAACGCCAGAACGTTCATGCTGCAATTGCTTCCAAGTCACCAACTCCTGACATTGCAACCACGTATCTTGACAAGCTCGGCATCAGGTCAATGTTTGTCGCCGAGATCTCAAAAATTGGAGTAACAAGTATTTTGGTCAGAAATGGGGTAAATCTTGAAGCATTTAGAAACGGCCTCGCAAAATTTTCTCAAAACGGGAATGCATCAAAGAAGAACAAGCAGAAAAGGCCCAAGTAA 417 0.4508 MEEVEQVKAEALQIMGVFQLLPKLVVFDLDYTLWPFYCECRSKHDTPYLFPHSRGILHALKRQNVHAAIASKSPTPDIATTYLDKLGIRSMFVAEISKIGVTSILVRNGVNLEAFRNGLAKFSQNGNASKKNKQKRPK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03335 138 Gene3D - 6 95 IPR023214 -
Vimu11g03335 138 SUPERFAMILY HAD-like 22 93 IPR036412 -
Vimu11g03335 138 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 94 132 IPR010036 GO:0016791
Vimu11g03335 138 Pfam Acid Phosphatase 21 89 IPR010036 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03335 Vimu-Chr11 53934146 53936117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03335 K17619 - gmx:100795199 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03335 11 53934146 53936117 Vimu11g03335 11 53934146 53936117 ECH
Vimu11g03335 11 53934146 53936117 Vimu2g00462 2 2633109 2633936 PCT