Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02902 ATGGCTCAAGATAATGCTGCATGCAACCATGCAAGTGCTGTCACTGGCAACAAAGGTGGTGATACTAACAAAAATGCAGGTGCTGCAAAGAAAGTGGAGGAGGTGCAGCCACATGCTGTGCATGAACAATTGCCTGGAGTTCAATATTGCATCAAGAGTCCTCCTCCATGGCGTTACACAATCTTACATATCATTGCAAAAGATAGAGATATGCTTCATGATGCAGGTGAAGCAGTGCTATTGGGGTTTCAGCATTTCCTTCTGACTCTCGGAGTTACCGTTCTGATTCCAACTATGCTTGTTCCTCAAATGGGTGGAGGAGTAGCTGAGAAGACACGAGTGTTTCAGACACTTTTGTTTGTTTCTGGAATAAGCACATTTCTTCAATCCTTGTTTGGAACTCGACTTCCAATTGTAGTTGTTGGTTCATACACTTACATAGTACCTATAACATCTATTATCCATGCCAGAAGATACAATTCATACACGGATTCTTACGAGAGGTTTATTCAGACAATCAGAGCTATACAAGGTGCCTTGATCATAACTGCATGTTTCCAGATGGCTGTTGGATTCTTTGGCTTTTGGAGGAATGCTGTCAGGTTTCTCAGTCCACTCAGTGTAGTCCCTTATATAACTTTCACAGGACTCAGCCTCTATCGTTTTGGTTTCCCACTGGTGACAGAATGTGTTGAAATTGGGCTTCCAACATTAGTTGTATTTGTTTTCATATCGCAGGCAAGTTGGTCTTGCACAGTTGTTTACATGTTTGCTTTGTCCCACTTGATCTTGTATCTTAATCGTTATATTGGCATGAAAAGGCCTATATGTGACCGATATTCGGTGCTCTTCACTGTTACAATTGCATGGTTATTTGCACTGTTTCTAACTTCATGCACTGTGTATAACAACAAATCAGAAAGTACACAGAATAATTGCCGCACTGATCGTGCTGGACTTATTACAGCCGCTCCATGGGTGTATTTTCCGGGCTTCTTCCAATGGGGGCCTCCTACATTCAATGCTGGGGAGGCTTTAGCAATGATCGCTGCTTCCTTCGTTTCTTTTTTTGAGTATACTGGTACATGCTATGCTGCAGCAAGATATGGAAGTGCCACACCAGTGCCACCATCTGTTATCAGCCGTGGAGCTGGTTGGGTGGGAGTAAGTGCTTTGCTGAGTGGCGTGTTTGGTTCTATAACAGGGTCTACGGCATCAGTAGAAAATGCTGGTTTGTTAGCGTTGACAAAAGCAGGAAGCAGAAGAGTGGTTCAAATATCATCTGCTTTTATGATTCTCTTCTCTATATTCGGAAAATTGGGGGCCTTTTTTGCTTCGGTACCGATGCCAATTACAGCAGCATTATACTGTGTGTTATTCGGCTACGTTTCTTCGGGGGGGCTTGGTTTTCTGCAATTCTGTAACCTGAACAATTTCAGAACGAAATTTGTGTTGGGATTGTCGTTCTTCCTAGGGCTGTCCATACCACAATATTTCAGAGAATACTATGAGGTGAAGGAGCATGGTGGAATTCCCTTATGGTTGAATGATGTTGTGAGTGTGATATTGATGTCTCACACAACAGTTGCAGCTTTGATTGGTTTCGTTTTGGATGTCACACTGTCTCGTGAGGATGATTGTGCACGTAAAGACATCAGTTTGCAGTGGTGGGAGAGATTCAGCTTGTACAGCGCAGATGTTAAGAATGATGAGTTCTACTCTTTACCATGCAGACTTGACAAGCTTTTTCCACCTTCTTAG 1761 0.4287 MAQDNAACNHASAVTGNKGGDTNKNAGAAKKVEEVQPHAVHEQLPGVQYCIKSPPPWRYTILHIIAKDRDMLHDAGEAVLLGFQHFLLTLGVTVLIPTMLVPQMGGGVAEKTRVFQTLLFVSGISTFLQSLFGTRLPIVVVGSYTYIVPITSIIHARRYNSYTDSYERFIQTIRAIQGALIITACFQMAVGFFGFWRNAVRFLSPLSVVPYITFTGLSLYRFGFPLVTECVEIGLPTLVVFVFISQASWSCTVVYMFALSHLILYLNRYIGMKRPICDRYSVLFTVTIAWLFALFLTSCTVYNNKSESTQNNCRTDRAGLITAAPWVYFPGFFQWGPPTFNAGEALAMIAASFVSFFEYTGTCYAAARYGSATPVPPSVISRGAGWVGVSALLSGVFGSITGSTASVENAGLLALTKAGSRRVVQISSAFMILFSIFGKLGAFFASVPMPITAALYCVLFGYVSSGGLGFLQFCNLNNFRTKFVLGLSFFLGLSIPQYFREYYEVKEHGGIPLWLNDVVSVILMSHTTVAALIGFVLDVTLSREDDCARKDISLQWWERFSLYSADVKNDEFYSLPCRLDKLFPPS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02902 586 NCBIfam purine/pyrimidine permease 80 495 - -
Vimu1g02902 586 MobiDBLite consensus disorder prediction 1 25 - -
Vimu1g02902 586 MobiDBLite consensus disorder prediction 1 22 - -
Vimu1g02902 586 Pfam Permease family 77 500 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu1g02902 586 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 29 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02902 Vimu-Chr1 41447189 41450545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02902 31 584 Organic Solute Cotransporters AT1G65550 57.345 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02902 - - pvu:PHAVU_001G028700g 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02902 1 41447189 41450545 Vimu1g02902 1 41447189 41450545 ECH
Vimu10g03217 10 42611401 42615457 Vimu1g02902 1 41447189 41450545 PCT