Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03217 ATGACAGAGGGCGGTGACAGTGGTGGTTGCGGTGGCAGTGGCGGTAATAAAAAGACACAACCTGAAGTTGCTTTAGCTCTACCACATCCAGTGAAAGAACAATTACCTGATGTTCAGTATTGCATTAAGAGTCCTCCTCCTTGGCAACAAGCAGTGTTATTGGGATTCCAGCATTATATTCTGACTCTTGGTGTGACAGTTCTGATTCCAACTACGATCGTTACTGAAATGGGTGGGGGTCATGCCGAGAAGGCCAAGGTGATACAGAATCTGTTGTTTGTTTCTGGAGCAAGCACGCTTCTGCAATCTTGGTTTGGAACACGATTGCCAACCGTAGTTGTTGGTTCATACAGTTTCCTAATACCCACAATGTCAATTGTCCATGCCAAGAGATACAGTTCATATACAGATCCTTATGAGAGGTTCACTCATACAATTAGAGGGATACAAGGCGCCTTGATTGCGAGTGCATGTTTCCATATAGTTGTGGGATTCTTGGGCCTTTGGAGGGGTGCTGTCAGGTTCCTTAGCCCACTTTCTGTTGTCTCTTACGTAACTTTCACTGGACTCGGTCTCTATCATCTTGGATTCCCAATGCTGGCAGAATGTGTTGAAGTGGGGCTTCCAGCACTGATTGTTTTGTATCTTAATAGATTTATTAGCCCCAACAAGTTTATCAACGGCAGATTTGCGGTGTTGTTTTCCATTGCAAGTGCATGGTTAATTGCACAGATTCTGACTGCAAGCACTGTATACAACAAGAAGCCAGAAGATACCGAGAATAGTTGCCGCACTGATCGTTCTGGTCTTGTCAGTTCTTCTAGTTGGGTATATCTCCCTTTTATTCCCTTCCAATGGGGGGCTCCTACATTCAACTTCGGAGAAGCTTTGGCTATGATAGCAGCTTCTTTTGTTTCTCTTTTTGAGTCTACCGGTGCATTTTATGCCGCGGCAAGGTATGGAAGTGCAACACCCGTGCCACCACATGTTATTGGCCGCGGAGCTGGCTGGGTGGGAGTAGCTTCTTTTTTCAGTGGCATTTTGGGTTCTGTAACTGGATGTACGGCATCAGTGGAGAATGCTGGATTATTGGCACTGACTAGAGTGGGAAGCCGAAGGGTCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCCATATTTGTGTTATTATTCTCTTCAATTAGTGATATCTCATATTGCACACTTTCCCTTCAACCAGGAAAAGTGGGAGCAATTTTTGCTTCTATACCTTTGCCAATCATAGCAGCATTAAACTGTGTGCTCTTGGGCTATGTCTGTAAGTTCTCTCTAACCAACTGTCTTTGTAGAGCTTTGCTAGTCATGAACTTGACAAGAGTTTACAATTTGGGATATGCAGCTTCTGCAGGTCTTGGTTTTCTCCAGTTCTGTAACCTCAACAGTTTCAGAACCAAATTCGTGCTGGGCTCTTCATTCTTCCTCGGCCTCTCCATACCACAATATTTCATAGAAATTTTTCACGTGAAGCATCAACACGGCTGGTTCAATGATATGGTTAGCGTGATCTTTATGTCCCACACAACAGTGGCGGGGTTGATTGCATTCGTTTTGGACACCACACTCACATGCGAAAATGATGCAGCCCATAGGGACAGTGGTTTGCAGTGGTGGGAGAAGTTCAGTGTATATAATGCTGATGGTCGGAACGATGATTTCTATAGATTACCATGCAAACTCAACGACCTCTTTCCCGCTATTTAA 1743 0.4429 MTEGGDSGGCGGSGGNKKTQPEVALALPHPVKEQLPDVQYCIKSPPPWQQAVLLGFQHYILTLGVTVLIPTTIVTEMGGGHAEKAKVIQNLLFVSGASTLLQSWFGTRLPTVVVGSYSFLIPTMSIVHAKRYSSYTDPYERFTHTIRGIQGALIASACFHIVVGFLGLWRGAVRFLSPLSVVSYVTFTGLGLYHLGFPMLAECVEVGLPALIVLYLNRFISPNKFINGRFAVLFSIASAWLIAQILTASTVYNKKPEDTENSCRTDRSGLVSSSSWVYLPFIPFQWGAPTFNFGEALAMIAASFVSLFESTGAFYAAARYGSATPVPPHVIGRGAGWVGVASFFSGILGSVTGCTASVENAGLLALTRVGSRRVIQISAGFMIFFSIFVLLFSSISDISYCTLSLQPGKVGAIFASIPLPIIAALNCVLLGYVCKFSLTNCLCRALLVMNLTRVYNLGYAASAGLGFLQFCNLNSFRTKFVLGSSFFLGLSIPQYFIEIFHVKHQHGWFNDMVSVIFMSHTTVAGLIAFVLDTTLTCENDAAHRDSGLQWWEKFSVYNADGRNDDFYRLPCKLNDLFPAI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03217 580 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 25 441 - -
Vimu10g03217 580 Pfam Permease family 50 439 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03217 Vimu-Chr10 42611401 42615457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03217 28 579 Organic Solute Cotransporters AT1G65550 54.754 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03217 - - gmx:100800316 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03217 10 42611401 42615457 Vimu1g02902 1 41447189 41450545 PCT