Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02846 ATGGAATCGTCGGTGACTCGTTTTGACTCGCTCGAGTTTATTAACACCACCATCACTCACTCAGACAAACACATCATTGTTCGTTTCGTTTCGTTGTGTTGCCATAACAACAGCATCGATACAAAACGCGATTCTGCATTCGCGATTCCACTCTCGAATCACTTTCCATTCCATGGCCGATTCAACCTCAAGCGATTCTCTCTCGCTAGACATCGATTCCTTCTCTCCTTCACCTCAGATGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCCGAGGCATATTACCTTCTGCTCCACAATTTCTGCATTTATCACATTAGTCCACCTGGGCATGAGTTAGGAGCTGTTCCAATTGATCCAGATTACCCAATTCTTTCTGTAGATGACTTAGCTGATCAAATAGCCGAGGTTCTCAACTTTTTCGGTCTTAGCGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACGTTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTTCTTGGTTTGATACTTGTTTCGCCTCTATGTAAAGAACCATCTTGGGCTGAATGGTTGTACAACAAGGTCATGTCAAATTTGCTATACTTCTATGGCATGTGTGGCGTAGTAAAGGAAATATTGCTGAAGCGGTACTTCAGCAAGGAAATTCGAGGTGGTTCACAATTGCCGGAGTCGGATATTGTTAAAGCTTGCCGAAGGTTGTTGGATGAGAGGCAGAGTTTGAACGTGTGGCGATTCCTGGAGGCTATTAACGGGAGACCTGACATAAGTGAAGGGTTGAGAAAATTACAGTGCCGTTCACTTATTTTTGTTGGGGATATGTCACCATTTCACTCGGAGGCTCTCCACATGACTTCGAAATTGGACAGACGATTCAGTGCCTTAGTTGAGGTATTGAAAATAGTTTATCAATCTGTGACAAGGTTATGTAATATTGGAATCGGGTTTAGCTTTACTATATCTGCTGGTGAAACAACAGGTTCAAGCATGTGGGTCAATGGTAACAGAGGAGCAGCCTCATGCGATGTTAATACCGATGGAGTACTTTCTGATGGGATATGGCTTGTACAAGCCATCGAAGCTGAGTGTCAGCCCAAGAAGCCCCTTGAGTCCATCTTGCATATCTCCCGAGCTTTACTCCCCAGAGAGTATGGGTTTAAAATTGAAACCCATAAAGACACGAATTTCTGTGGAAATCTAGATGTAGATGGAACGGAGTGA 1230 0.4366 MESSVTRFDSLEFINTTITHSDKHIIVRFVSLCCHNNSIDTKRDSAFAIPLSNHFPFHGRFNLKRFSLARHRFLLSFTSDVSCFQGLLFCPEAYYLLLHNFCIYHISPPGHELGAVPIDPDYPILSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYVLTLFAMKYRQRVLGLILVSPLCKEPSWAEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGGSQLPESDIVKACRRLLDERQSLNVWRFLEAINGRPDISEGLRKLQCRSLIFVGDMSPFHSEALHMTSKLDRRFSALVEVLKIVYQSVTRLCNIGIGFSFTISAGETTGSSMWVNGNRGAASCDVNTDGVLSDGIWLVQAIEAECQPKKPLESILHISRALLPREYGFKIETHKDTNFCGNLDVDGTE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02846 409 Gene3D alpha/beta hydrolase 51 305 IPR029058 -
Vimu1g02846 409 Pfam Ndr family 81 302 IPR004142 -
Vimu1g02846 409 SUPERFAMILY alpha/beta-Hydrolases 93 282 IPR029058 -
Vimu1g02846 409 PANTHER N-MYC DOWNSTREAM REGULATED 81 301 IPR004142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02846 Vimu-Chr1 40753956 40758298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02846 - - gmx:100815084 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02846 1 40753956 40758298 Vimu1g02846 1 40753956 40758298 ECH
Vimu10g03162 10 42187202 42190813 Vimu1g02846 1 40753956 40758298 ECH
Vimu1g02846 1 40753956 40758298 Vimu10g03162 10 42187202 42190813 PCT