Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02806 ATGGAAGAAGGTTTCCCCAAAAACATGTTCAAGAAGCTTTGTGTCTTCTGCGGCAGCAACTCCGGTAATCGCCAAGTTTTCAGTGACGCCACCATTGAACTGGCCAATGAACTGGTTAAGAAGAACATTGACTTGGTGTATGGTGGAGGAAGTGTTGGGCTAATGGGCTTAATATCCCAGAGAATGTATGATGGAGGCTGCCATGTTCTTGGGTATGCTAAAGCAACATACTTTATATCTGGTAAACCAGTTGGTGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATCGCTCTACCTGGTAGAGGATATGGAACAATGGAAGAGCTGTTGGAGATGATAACTTGGGCTCAACTTGGAATTCATAAAAAGCCGGTTGGTCTACTGAATGTCGATGGTTACTACGACTCGTTGCTTGCATTGTTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCGTGGTGCTCGGGATATTCTCGTTGCGGCTTCATCAGCCAAAGAACTTATGATGAAATTGGAGGTCTAG 558 0.4373 MEEGFPKNMFKKLCVFCGSNSGNRQVFSDATIELANELVKKNIDLVYGGGSVGLMGLISQRMYDGGCHVLGYAKATYFISGKPVGEVRIVSDMHERKAAMAQEADAFIALPGRGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYDSLLALFDNGVKEGFIKRGARDILVAASSAKELMMKLEV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02806 185 Gene3D - 4 185 - -
Vimu1g02806 185 NCBIfam Rossman fold protein, TIGR00730 family 12 183 IPR005269 GO:0009691|GO:0016787
Vimu1g02806 185 PANTHER LOG FAMILY PROTEIN YJL055W 8 184 - -
Vimu1g02806 185 SUPERFAMILY MCP/YpsA-like 8 182 - -
Vimu1g02806 185 Pfam Possible lysine decarboxylase 55 182 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02806 Vimu-Chr1 40371802 40376047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02806 K22522 - gmx:100819765 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02806 1 40371802 40376047 Vimu10g03137 10 42050559 42052695 PCT