Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03137 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGCAGCAACTCTGGCAACCGGCAAATCTTCAGCGACGCTGCGATTCAATTGGGCAATGAACTGGTAAAGAGGAACTTAGACTTGGTGTATGGTGGTGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTCTATGATGGAGGCTGCCATGTCCTGGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATACGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTGGTGCACGGAATATTGTTGTCTCTGCTACTTCTGCTAAAGAACTTATGATGAAGATGGAGCATTACAGTCCTTCGCAGGAACATGTTGCCCCTCATGAGAGCTGGCAGAAGAAGCAATTAGGTGATTATCCAGATGGTGAGTGA 642 0.4579 MEEGYPRSKFKTVCVFCGSNSGNRQIFSDAAIQLGNELVKRNLDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSATSAKELMMKMEHYSPSQEHVAPHESWQKKQLGDYPDGE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03137 213 MobiDBLite consensus disorder prediction 188 213 - -
Vimu10g03137 213 MobiDBLite consensus disorder prediction 191 213 - -
Vimu10g03137 213 Gene3D - 9 204 - -
Vimu10g03137 213 NCBIfam Rossman fold protein, TIGR00730 family 11 188 IPR005269 GO:0009691|GO:0016787
Vimu10g03137 213 SUPERFAMILY MCP/YpsA-like 9 188 - -
Vimu10g03137 213 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Vimu10g03137 213 PANTHER LOG FAMILY PROTEIN YJL055W 7 207 - -
Vimu10g03137 213 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03137 Vimu-Chr10 42050559 42052695 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03137 K22522 - gmx:100785484 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02806 1 40371802 40376047 Vimu10g03137 10 42050559 42052695 PCT