Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02805 ATGTGGGAATCTATTCTACTGACGGTGGCTGCCACCGCCGGCAACAACATTGGAAAGATCCTTCAGAAGAAGGGCACTATCATTCTTCCACCCCTTTCTTTCAAACTCAAGGCATGTCTAAAGTTCCATTTTTTTGTGTGTTTTAAATTGGTCATAAGGTCTTATGCTTCAAACAGAACCTGGGTGATTGGTTTTCTAGTGGATATATTTGGGGCATTATTGATGTTAAGGGCATTGTCTTTGGCTCCAGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTAGCAATTCTATCACTCTTTTCCCATTTTTATCTCAAGGAAGTCATGAATGCTGTTGATTGGGTTGGCATTACATTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGAAGCATGAGGTGGTTGCTCTATCTATTTTTCGCTTACCAGCGTTGGCATTTGTTGTTTTCATCTTGTTTGTAGAAAAATTTGTGCAGATACTGCTTAATGGATGGGTTCGAATATGCAAGAGTCAACGAAGAGAACAAGAAATGATGGAATATGACGTCGTTGAGGAAATCATCTATGGCTTGGAATCTGGTATTTTGTTTGGGATGTCATCTGTCATATCAAAGATAGGATTTATATTCCTGGATCAAGGTTTTCCCAAGCTGTTGGCTCCTGTGTGCATCTTGATCAGTGTCTGCTGTAGTGGCACAGGCTTTTACTACCAGACACGTGGTCTAAAGCATGGGAGAGCTATTGTGGTTTCTACATGTGCAGCTGTGGCATCAATTTTGACTGGTGTACTTGCTGGGATGTTTGCTTTGGGTGAGCGACTTCCTTCAGAACCGAAAGCTCGCCTCGCACTTCTTCTTGGATGTCAAAGGAAAGAGGACTCAGGAGTATACCTGAGTATTCATGCTTTTGGAATGAATATGAGCATTAAGTTGCTTTCTAATCCGATTGGCAAGGGCAGGGTGTGTTGTACGAGTATAGTGGCTGCTTCATCAGAGGATATTTTGGTGTGA 1020 0.4284 MWESILLTVAATAGNNIGKILQKKGTIILPPLSFKLKACLKFHFFVCFKLVIRSYASNRTWVIGFLVDIFGALLMLRALSLAPVSVIQPVSGCGLAILSLFSHFYLKEVMNAVDWVGITLAGFGTIGVGAGGEKHEVVALSIFRLPALAFVVFILFVEKFVQILLNGWVRICKSQRREQEMMEYDVVEEIIYGLESGILFGMSSVISKIGFIFLDQGFPKLLAPVCILISVCCSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMFALGERLPSEPKARLALLLGCQRKEDSGVYLSIHAFGMNMSIKLLSNPIGKGRVCCTSIVAASSEDILV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02805 339 Gene3D - 5 131 - -
Vimu1g02805 339 FunFam Probable magnesium transporter 5 132 - -
Vimu1g02805 339 PANTHER UNCHARACTERIZED 2 291 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vimu1g02805 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02805 Vimu-Chr1 40367221 40372154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02805 - - gmx:100819228 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02805 1 40367221 40372154 Vimu10g03136 10 42038739 42042096 PCT