Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03136 ATGTGGGAATCAATTGTTTTGACGGTGGTTGCCACCGCCGGCAACAACATCGGCAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTCAAGTATGACATTTGGTACTTGTTGCCAATTTTGTTGTGTTTGCAGGTCATAAGGGCATATGCTTTGAATAAAACCTGGCTCATAGGTTTTCTGATGGATATATTTGGGGCACTGTTGATGTTAAGGGCATTAGCTCTGGCTCCTGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTGGCAATTCTTTCGGTCTTTTCTCATTTTTATCTCAAGGAAGTCATGAATGTTGTTGATTGGGTGGGCATTACCTTCGCAGGTTTCGGTACAATAGGAGTTGGTGCTGGAGGTGAGGAACAAGGGGCTGCTGCTCTATCTATATTTCACATACCGTGGCTGGCATTTGTTGTTTTCATCTTGTTTGTAGAACCACTTGTACAGATAATGCTTAATGGATGGCTTCGAATATGTAGGCGTAATCGAAGAGAACACGAGATGGTTGAATATGATGTTGTTGAGGAAATTATTTATGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGGTTCCTGTTCCTGGAGCAAGGCTTCCCCAAGCTCTTGGTTCCTATATGCATAATCGTAAGTGTCTGTTCAAGTGGTACAGGCTTTTACTACCAGACACGTGGTCTAAAACACGGAAGGGCTATTATAGTTTCTACATGCGCAGCTGTGGCATCAATTTTGACTGGTGTACTAGCTGGGATGCTTGCTTTGGGTGAGCGACTTCCTTCGGCACCAAAAGCTCGCATGTTACTCCTTCTAGGATGGCTACTTATTATTGTTGGGGTGATTTTACTTGTTGGTTCAGAAAAGCTAGTAAAATTCTTTCGATTGTCTTCACACCGCTTTAAAAGAAGCAACGTTGATAAAAGCTACGGCCATAGAAGATCTGCAACTTCACGTATTAGGGAACCTAGCCCAACTGCTGTCATTCAAGCGGCGACTGTAAATCATTTACTGTAA 1065 0.4329 MWESIVLTVVATAGNNIGKILQKKGTVILPPLSFKYDIWYLLPILLCLQVIRAYALNKTWLIGFLMDIFGALLMLRALALAPVSVIQPVSGCGLAILSVFSHFYLKEVMNVVDWVGITFAGFGTIGVGAGGEEQGAAALSIFHIPWLAFVVFILFVEPLVQIMLNGWLRICRRNRREHEMVEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPICIIVSVCSSGTGFYYQTRGLKHGRAIIVSTCAAVASILTGVLAGMLALGERLPSAPKARMLLLLGWLLIIVGVILLVGSEKLVKFFRLSSHRFKRSNVDKSYGHRRSATSRIREPSPTAVIQAATVNHLL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03136 354 Pfam Magnesium transporter NIPA 53 302 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vimu10g03136 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 39 131 - -
Vimu10g03136 354 PANTHER UNCHARACTERIZED 2 313 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vimu10g03136 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 203 304 - -
Vimu10g03136 354 FunFam Probable magnesium transporter 5 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03136 Vimu-Chr10 42038739 42042096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03136 - - gmx:100803982 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02805 1 40367221 40372154 Vimu10g03136 10 42038739 42042096 PCT