Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02753 ATGGCGTTTTCGAGGTCCTTGGCGTTCTCCGCGATTCTTCTTCCACTCTTCATCCATGGCGCACTCTGCTTCTACCTCCCTGGCGTTGCTCCACAGGACTTCCAGAAGGGAGATCCATTGCAAGTAAAAGTAAACAAATTAACTTCAACGAAGACTCAGCTTCCATATACATACTATTCTCTTCCGTACTGTGCACCAGAGAAAATATTGGATAGCGCTGAAAATCTTGGAGAAGTTCTTCGTGGTGATCGCATTGAAAATTCTCGATATGTGTTTAAGATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTTAAGCTTGATGCAAAAACTGCAAAAGAGTTCAATGAGAAGATTGATGATGAGTATCGAGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAACGGGTGGAACCGGACTCTACTGTTTATCAACTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAGCAAGGAAGAGAAGCATTTTATTCACAACCATTTGGCTTTTACGGTCAAGTATCATAGAGATACACTTACTGAATCTGCTAGAATTGTGGGTTTTGAGGTTAAGCCTTTCAGTGTTAAACACGAATATGAAGGGAAGTGGGATGAACAGGCCACCCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTGAATTCGAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACTTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTGAATTCATTGATGATTGTTCTCTTTCTCTCGGGCATGGTAGCAATGATAATGCTTCGTACACTTTACCGTGATATTTCAAAGTACAATGAATTAGAAACCCAAGAAGAAGCACAGGAAGAGACTGGTTGGAAGCTTGTCCACGGTGATGTTTTTAGGCCACCAAACAATCCAGATTTGCTATGTGTTTATGTTGGGACTGGTGTTCAGTTTTTTGGAATGATACTAGTAACAATGATGTTTGCTGTCCTGGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTAATGACGGTCATGCTCTTGCTTTGGGTTTTCATGGGAATTTTCGCTGGTTATGCCTCGGCTCGCTTATATAAAATGTTCAAAGGAGCAGAGTGGAAGAAAATTGCCCTCAAAACTGCAATCATGTTCCCTGGAATCGTTTCTGCCATTTTCTTTGTATTAAATGCTCTGATATGGGGACAAAAATCGTCTGGAGCAGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATCTCTGTTCCACTTGTTTTTGTTGGTGCCTATGTTGGGTTTAGGAAGCCTGCGACTGAAAGTCCTGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCATGGTACATGAATCCAGTCTTCTCAATTCTGATCGGAGGAATACTTCCATTTGGAGCTGTTTTCATTGAACTTTTCTTCATCCTCACTTCAATATGGTTGAATCAGTTCTACTACATCTTCGGCTTCCTCTTCTTAGTCTTTGCCATCCTCATTGTCACTTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCTTACCTTACATCTGGCTCATCTGCTCTTTATCTATTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGGGTTATTGTACTTCGGTTACATGCTTATAGCTTCCTATGCCTTCTTTGTTGTAACTGGATCCATCGGATTTTACGCATGCTTTTGGTTCACAAGGCTCATCTATTCCTCGGTCAAGATTGATTAG 1914 0.4206 MAFSRSLAFSAILLPLFIHGALCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYTYYSLPYCAPEKILDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFNEKIDDEYRVNMILDNLPLVVPIKRVEPDSTVYQLGFHVGLKGQYTGSKEEKHFIHNHLAFTVKYHRDTLTESARIVGFEVKPFSVKHEYEGKWDEQATRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNPDLLCVYVGTGVQFFGMILVTMMFAVLGFLSPSNRGGLMTVMLLLWVFMGIFAGYASARLYKMFKGAEWKKIALKTAIMFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFRKPATESPVKTNKIPRQIPEQAWYMNPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGSIGFYACFWFTRLIYSSVKID 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02753 637 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016020
Vimu1g02753 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 637 IPR004240 GO:0016020
Vimu1g02753 637 SUPERFAMILY MFS general substrate transporter 275 464 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02753 Vimu-Chr1 39771483 39775636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02753 11 637 Miscellaneous Gene Families AT5G10840 84.897 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02753 K17086 - gmx:100810506 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02753 1 39771483 39775636 Vimu1g02753 1 39771483 39775636 ECH
Vimu1g02753 1 39771483 39775636 Vimu10g03041 10 41330801 41334360 PCT