Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03041 ATGGCGTTTTGGAGATCTCTCGCCTTCTCTGCGGTTCTTCTGCTTCTGATCCATGCCTCTCACTGCTTCTACCTCCCTGGCGTCGCACCACAGGACTTTCAGAAGGGAGATCAATTGCAAGTGAAAGTAAATAAATTAACGTCAACAAAGACCCAGCTTCCATATTCATATTATTCACTTCCTTATTGCGGCCCAGAAAAAATACAGGACAGTGCAGAAAATCTTGGAGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTTTATGCGTTTAAAATGCGTGAGCCACAAATGTGCAATATTGTGTGTAATGTTAAACTTGATGCCAAAACTGCCAAGGAGTTCAAAGAGAAGATCAGTGACGAGTATAGGGTGAACATGATTCTTGATAACCTTCCCCTAGTTGTTCCCTTGAAACGAAATGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGCAGTACAGTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTGGCATTTACTGTCAAGTACCATAAAGACGTCCTAACTGAATCTGCTAGAATAGTGGGCTTTGAGGTTAAGCCATTCAGTGCTAAACATGAATACGAAGGTAAATGGGAAGGAAAAACAACTCGTTTAACAACCTGTGACCCTCATGCTAAAAGCACAGTTGTCAACTCCAACTCTCCCCAAGAGGTTGAAGAGGGCAAAGAAATTATCTTCACCTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCATCAAGATGGGATGCCTATTTGCTAATGAATGATGATCAAATCCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCGGGCATGGTGGCAATGATAATGCTGCGTACACTATACCGTGACATTGCAAAATATAACGAGCTTGAGACCCAAGAAGAAGCCCAGGAGGAGACTGGTTGGAAGCTTGTCCATGGTGATGTGTTTAGGCCCCCTACTAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGCATGATGCTGGTAACTATGTTGTTTGCTGTCCTTGGATTTCTTTCACCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATATTTGCCGGTTACTCATCAACTCGTTTGTACAAAATGTTTAAAGGATCGGAGTGGAAAAAAGTTGCCCTCAGAACTGCAACCATGTTCCCTGCCATTGTCTCTGCCATTTTCTTTGTTTTAAATGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTTGTGGGTAGCTATGTCGGATTCAAGAAGCCTGCGATTGAGAATCCTGTGAAAACGAACAAGATCCCTAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTTTTCTCAGTTTTGATTGGTGGAATACTCCCGTTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACATCAATCTGGTTGAATCAGTTTTACTATATCTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATCGTGACTTGTGCGGAAATAACCATCGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGATCATATCTTACCTCTGGTTCCTCTGCTCTTTACCTCTTTCTTTACGCAACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCGATATTTTACTTTGGGTACATGCTCATAGCTTCTTATGCATTTTTTGTGGTGACCGGTACAATCGGATTTTATGCATGCTTTTGGTTCACTAGGCTCATCTACTCCTCCGTCAAAATTGATTAG 1911 0.4249 MAFWRSLAFSAVLLLLIHASHCFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYSYYSLPYCGPEKIQDSAENLGEVLRGDRIENSLYAFKMREPQMCNIVCNVKLDAKTAKEFKEKISDEYRVNMILDNLPLVVPLKRNDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHKDVLTESARIVGFEVKPFSAKHEYEGKWEGKTTRLTTCDPHAKSTVVNSNSPQEVEEGKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMLFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSTRLYKMFKGSEWKKVALRTATMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03041 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 22 636 IPR004240 GO:0016020
Vimu10g03041 636 Pfam Endomembrane protein 70 54 592 IPR004240 GO:0016020
Vimu10g03041 636 SUPERFAMILY MFS general substrate transporter 275 460 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03041 Vimu-Chr10 41330801 41334360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03041 8 636 Miscellaneous Gene Families AT5G10840 84.628 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03041 K17086 - gmx:100780976 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03041 10 41330801 41334360 Vimu10g03041 10 41330801 41334360 ECH
Vimu1g02753 1 39771483 39775636 Vimu10g03041 10 41330801 41334360 PCT