Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02742 ATGTCTAAAAAAAAACTACAAATATTGGAGAGAGGTTCTGCTAGATACCACGATGGGTATGGCAGACTGCGATCATGGGCATATAGGTCACTTGAATCATACAAGGTAGCATGGCATTTTGTTACTGTCTTGTTTAAAGTTCATTCACGAAATTGCCATGTTTCAGTTTCTTACACATGGTTTACCGTTTCTTTGCAGCACGAATTACTGCGTGTGCTTTATCCAGTATTCGTCCATTGCTTCATGGATCTTGTGGCAAAAGGGCATCTTCAGGAAGGTATGAAATATTTCTTCACACAGGCATTTAACTATAATTATTAA 321 0.3801 MSKKKLQILERGSARYHDGYGRLRSWAYRSLESYKVAWHFVTVLFKVHSRNCHVSVSYTWFTVSLQHELLRVLYPVFVHCFMDLVAKGHLQEGMKYFFTQAFNYNY 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02742 106 SUPERFAMILY Taf5 N-terminal domain-like 65 97 IPR037264 -
Vimu1g02742 106 Pfam WD40 associated region in TFIID subunit, NTD2 domain 66 97 IPR007582 -
Vimu1g02742 106 Gene3D TFIID subunit TAF5, NTD2 domain 10 103 IPR037264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02742 Vimu-Chr1 39616656 39627604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02742 K03130 - gmx:100790500 96.2857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02742 1 39616656 39627604 Vimu10g03026 10 41152165 41166149 PCT