Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02663 ATGTTGTGTAAACTCGTTCCTGTGCCGCGCAAGAAAAAACCCGGTTCGAACCCGGTTTACCTTAACGTCTACGATCTCACACCGATTAACGGTTACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGCGTTCAAGGTAACCACCCAGTTACCTTTTCTTTTTCCAATTCAGCTTCCTTTGTTATCAAAGGGATTGAACGGAAATTCGGTTTCTGGGTATTGTCAATTTTTAATTCAGATCCGTGGAATAGTGTAAGTGTTAATTTTGTTATTGAAGGGTGGATACAGCTGGATTTTGAGTTGGGAAAAATACTGAAATTGGAGAGTGGTTTAGTGACTTCATTTGTTGTTGTTGTTGTTGTAGTTCATGGGGTTGAATATGGATTTGGAGCTCATGATCGTGACACGACCGGGATTTTTGAAGTGGAGCCTAGACGCTGTCCTGGATTCACCTTCAGGAAATCGATTTTCATTGGATCGACGGATATGGGGGCGAGGGATGTTCGTGAGTTAATGGAGAGGATGGCTGAAGACTATTCTGGGAACACCTACCACCTTATCCAGAAAAATTGCAACCATTTCTGCGATGATGTTTGTGTCAAACTAACGGGGAAGTCCACCCCTCGCTGGGTGAATCGACTTGCTAGACTTGGTAAGGGATATTTGCTTTCTTCGTCATGTTTGTATGAGTTGATTCTTCACTCAGGTTTTTGTGCTGAATATGAAGGTTTTCTCTGCAACTGTGTTCTTCCACCTAGCCTAAATGAGACAAAGGTTCGCCAAGTTACATTAGACAGGGTTCAAGACGGAGAGAAGAAGAAAGTAAGAACGCATTCCAGCAGGTACGAGGCTTCACCCAAACCTCCATTGTCTAGTAGCCGAAGACACTGCCTTCCTCCATCTTCTGTAATTAATGCTTCTCCGTCCTCAACCATAACAGTAAAGTAA 951 0.4353 MLCKLVPVPRKKKPGSNPVYLNVYDLTPINGYAYWLGLGVYHSGVQGNHPVTFSFSNSASFVIKGIERKFGFWVLSIFNSDPWNSVSVNFVIEGWIQLDFELGKILKLESGLVTSFVVVVVVVHGVEYGFGAHDRDTTGIFEVEPRRCPGFTFRKSIFIGSTDMGARDVRELMERMAEDYSGNTYHLIQKNCNHFCDDVCVKLTGKSTPRWVNRLARLGKGYLLSSSCLYELILHSGFCAEYEGFLCNCVLPPSLNETKVRQVTLDRVQDGEKKKVRTHSSRYEASPKPPLSSSRRHCLPPSSVINASPSSTITVK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02663 316 MobiDBLite consensus disorder prediction 266 282 - -
Vimu1g02663 316 Gene3D PPPDE domains 107 230 IPR042266 -
Vimu1g02663 316 ProSiteProfiles PPPDE domain profile. 17 237 IPR008580 GO:0008233
Vimu1g02663 316 MobiDBLite consensus disorder prediction 296 316 - -
Vimu1g02663 316 Pfam PPPDE putative peptidase domain 119 220 IPR008580 GO:0008233
Vimu1g02663 316 PANTHER DESUMOYLATING ISOPEPTIDASE 16 283 IPR008580 GO:0008233
Vimu1g02663 316 SMART DUF862_2a 17 235 IPR008580 GO:0008233
Vimu1g02663 316 MobiDBLite consensus disorder prediction 266 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02663 Vimu-Chr1 38519241 38521047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02663 K22763 - gmx:100786432 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02663 1 38519241 38521047 Vimu10g03009 10 41000906 41002458 PCT