Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02661 ATGTTCTTCTCTTCCCTCTCTTCCTGCTTCCTCTCTTCCAAACCCACCACCCTCCACGACGCCACGCTCTCCACCATCCTCACCACCTTCATCTACCAAACCCAAAACGGCTCCGTTTCGCTCACATGGTCACGCTCCATGTTGGGTCGCTCCCTTCACCTCCACCTCCACAACCACTCCTCCTTCCACCTCCACCTCAAGCCCTGGAACAAAACCGGTTCCAAGAAACTCTCCCACAACACCCTCTTCCTCTGGAACCTTACCAAAGCCAGGTTCGGCTCCGGACCCGAACCTCTCTCCCGATTCTACCTCGCCCTCCTTGTTGACCACACCAACCTCATCCTCCTCGTCGGAGACCTCACCCCAAAGACCAAACCCCACAAACCTAACATCAAGACGCAACAAGTTCTCCTTCTCAAACGGGACCACGTCCACGCGGCGTCACACCGCAGCAGGGTGTACCAGACCAAGACCATACTCGGAGGTAAGGTTAGGGAAATCCAAATAGACTGCGACGCTTGCAGTAGCGAGGAGGAGAGTCTGAGGTTGGTTTTCTGTGTGGATGAGGAGAAGGTCCTGGAAGTGACGCGGTTGAAGTGGAAGTTCAGAGGGAGCGAGCGTGTGGAGGTAGATGGTGCCCACGTGCAGATCTCGTGGGACGTGCATGATTGGCTTTTCGAAAAGGATAAGGATCATGGTTATAGTAATTACGGCAGTGATGTGAGTGGCAACAGTGATGGTGGTAATGGTAAAAACGAGGGACATGCGGTTTTCGTGTTTAAGTTTGAGAATGATGAGGTAGGAGGCGGGAGTGGGAAGGAGGTGGATGTTGGGTGGTCGAGTGGGGAGTGGAAGAATGGAAAGAGTTGGTCGTCTTCTTCGCTGTCGGTTTCTTCTTCTGCTGGGTCTTTTGGAGGGAGTTCCTCTGTCATGGAATGGTCGAGCGTGGAGGAGAACGAATTGGTGGTTCCTTTTGGTTTCTCTTTGGTGGTTTATGCTTGGAGAAACTACCACCAACCTTGCCGCCGCCAAACCCTATCTCTACCACCATCAACCTCACCGTCAGCCACGAGCCTCCATGGCCACCACCATCAGAACCACAAATCGCCGTCATCTTCAACCATCACCACGAATCCTCCATTCACGCCACCAAACCCTGGCGTCGCCACAATCGACACCACCAGTCCTCACCTAGCTGCCTCCTCCATTAACGCACTAGCGCCTGTCCATGAGCTACTCACACCAGGCCGCACCATGAGAACTACTTTGTGTCTCCGTTGCACCGTCTACAGTGGCAAGATCATCTTCTTCACCAGAAACCTCCATGCGAAACCTTCACCAACGCTGCACTCAGAAAAACCAGCCTAA 1368 0.5358 MFFSSLSSCFLSSKPTTLHDATLSTILTTFIYQTQNGSVSLTWSRSMLGRSLHLHLHNHSSFHLHLKPWNKTGSKKLSHNTLFLWNLTKARFGSGPEPLSRFYLALLVDHTNLILLVGDLTPKTKPHKPNIKTQQVLLLKRDHVHAASHRSRVYQTKTILGGKVREIQIDCDACSSEEESLRLVFCVDEEKVLEVTRLKWKFRGSERVEVDGAHVQISWDVHDWLFEKDKDHGYSNYGSDVSGNSDGGNGKNEGHAVFVFKFENDEVGGGSGKEVDVGWSSGEWKNGKSWSSSSLSVSSSAGSFGGSSSVMEWSSVEENELVVPFGFSLVVYAWRNYHQPCRRQTLSLPPSTSPSATSLHGHHHQNHKSPSSSTITTNPPFTPPNPGVATIDTTSPHLAASSINALAPVHELLTPGRTMRTTLCLRCTVYSGKIIFFTRNLHAKPSPTLHSEKPA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02661 455 PANTHER EXPRESSED PROTEIN 7 335 IPR008586 -
Vimu1g02661 455 MobiDBLite consensus disorder prediction 345 393 - -
Vimu1g02661 455 MobiDBLite consensus disorder prediction 345 360 - -
Vimu1g02661 455 Pfam Plant protein of unknown function (DUF868) 27 335 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02661 Vimu-Chr1 38503319 38506226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02661 27 226 EF-hand Containing Proteins AT5G28150 35.484 1.20e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02661 - - gmx:100806546 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02661 1 38503319 38506226 Vimu1g02661 1 38503319 38506226 ECH
Vimu1g02661 1 38503319 38506226 Vimu10g03008 10 40990453 40994487 PCT