Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03008 ATGTCATCGTCGCCTTTTCCTCCCTGCTTCCGTCCCTCCCCCACCACCGACGTTCCCCCTCCTCCGCCGCCACCGCCGCCGCACTCCACAATCTCAAACCTCACAATCTACCACACAGACACAGGTCCCGTCTCCCTCACGTGGTCACGCTCCGTAGTGGGTCGCTCCCTTCACATTCAACTCCACCGCCAATCTTTCGACTCCGTCTCCTTCCACCTCCACTTACGACCCTTCGTCTTCTGGAAAAAGCACGGCGTGAAGAAGCTGGCCCCCGACACAGTCCTCTTCTGGAACCTTGCCAAGGCCAAATTTGGGTCCAACCCGGAACCCGTTTCGGGATTTTACGTTGCCCTTGTGGTTAACAGCCACATGAGCCTCCTCCTCGGCGACGCCGCCAGAGACGCGTATTCGAAGTCCCGGGCCCACCAACCGGCCACCCCGCAACTGCTCCTCCTCAAGAAAGAGCACGTCTTCGCCGACCGCGTCTACTCCACGCGCGCAACGTTCGGCGGCCGGGCGCGTGAGATTCAGATCGATTGCGGTTTCAGGGACCACTCCAAACTCTCGTTCAGCGTGGACGGCGAGAAGGTGCTGCAGATTAAGCGCCTCAAGTGGAAGTTTCGCGGCAATGAGCGCGTCGTAGTTGACGGCGTGCACGTGCAAATATCGTGGGACCTTTACAACTGGCTCTTCGACAAGAACAACGCCGACGCGCACGCCATTTTCATGTTCAAGTTCGAGGACGAGGAGGAGGAAACGGTGGCTGATAGGAACTTGGCGGGGTTGTGGAATTTGGGGGTTTGTGAATGGGGCAAGACTTGGTCTTCTTCTTCGGTTTCTTCTTCTGGTGGGTCCTTCGGCGGAAGCTCCTCTGTTTTGGAATGGTCCAGTGTGGAGGAGAATGAGTTGGTTGTTCCCGTTGGGTTTTCTTTGCTCGTCTACGCTTGGAAACGCTGA 957 0.5768 MSSSPFPPCFRPSPTTDVPPPPPPPPPHSTISNLTIYHTDTGPVSLTWSRSVVGRSLHIQLHRQSFDSVSFHLHLRPFVFWKKHGVKKLAPDTVLFWNLAKAKFGSNPEPVSGFYVALVVNSHMSLLLGDAARDAYSKSRAHQPATPQLLLLKKEHVFADRVYSTRATFGGRAREIQIDCGFRDHSKLSFSVDGEKVLQIKRLKWKFRGNERVVVDGVHVQISWDLYNWLFDKNNADAHAIFMFKFEDEEEETVADRNLAGLWNLGVCEWGKTWSSSSVSSSGGSFGGSSSVLEWSSVEENELVVPVGFSLLVYAWKR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03008 318 Pfam Plant protein of unknown function (DUF868) 42 317 IPR008586 -
Vimu10g03008 318 PANTHER EXPRESSED PROTEIN 32 317 IPR008586 -
Vimu10g03008 318 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03008 Vimu-Chr10 40990453 40994487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03008 41 317 EF-hand Containing Proteins AT3G04860 31.930 3.62e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03008 - - gmx:100783731 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02661 1 38503319 38506226 Vimu10g03008 10 40990453 40994487 PCT