Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02610 ATGGATCCAATTAACCTTTTACCTGCTGATGGGGTTGAAGTGGTCCACCAAAATGGTGTCCATGATGAACCTTCAAATTCTGGGGAGGATGGTGGTGCTCCATATGATTTAGACCCCAGTGTCACTGAAACTGCAGAAACTGTTGCTTCAAATGGAAATTTTGATAATTTCCATCAGTCAGATAGTGCTGCAATTGATAACTCATTTGTGGCAGAAATCAAAGAATCAGATGACATTGCCGATGGCAATAACGTGATCATTACTAAGGAAGAGGATACAAAAATATCAGACCAAACAAAACAATCAAGGGCACCAAAGGGTCTTGTCAAGAATAAGAATGCAAAGGCTCCAAGTTCCAGTGGAGTTCATGCAAGTTTGGCAAATAAGAGCAAAATTGGGAAAGATAAAGAAGCATCTTCATCTGTTTCAAATGGTACTTTAGCTTTAGACTCTCGCCCAAAACAGTCTATTAAAAGCAGCAGATTATTCAATGATCGGCAGACTCAATTGTCCAAGCCCAAGCACCCTTTGAAGTCTGATGAAGCATCTTCTGAAGTGTCAATGGAGAAGACAAAACCAAAATCATTGAGAAAAGGACCGGTTAAAGATCAAGGAGAAGAAGATTCTTCCCTAAGTATCAACAATGAAGATGCCAAACCTCAAAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGCGAACGAGCTGAGAGAAGAAAAGAGTTCTACAATAAGCTTGAGGAAAGGATTCAGGCAAAGGAGGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAAGATGCCGAGATTAAGAAGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCAAGTTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGGCCAAAGTCTCCCAAGTTTGGTCGTAAGAAGACTTCAGCTAATTCAGAGTCAGATGGAAACACTAGTAGCAGTTCAAGATTAGCTCGCCTAAGTCTGGATGAGAAAGTGTCAGAGAGTAAGGGACCTAATCCTGTCCTTCAAAAGAAACCGCTTCGAAGATCTCTTCCTTCTCGTCTGACCTCTGAAAAGAACAATGTATCAAAATCAACAACTGCACTTACATCATCCAAGGCCACCAAAGATGAAAAGTCTTCCTTATCTCGTGCTGCTAAAAAGAATATCAACATATCCAATGCTACAGGAGAAGAGAAAACCGACACGATTGCAGCGACCGAGAAGAAAAATATCTTGTCCAGTGAAACAGGTGATGCTGTGCCTCTGAATGTGGTTCCTTCAGATAATAAGCCAAGTGAAGAAGACTCTCATGTGAATGTTGATATAGCAGTTGAAGAGAATCCTCTGCTCCCATTGGCACAAGAAGCTGTTGCCACAGAGCAATGA 1431 0.4137 MDPINLLPADGVEVVHQNGVHDEPSNSGEDGGAPYDLDPSVTETAETVASNGNFDNFHQSDSAAIDNSFVAEIKESDDIADGNNVIITKEEDTKISDQTKQSRAPKGLVKNKNAKAPSSSGVHASLANKSKIGKDKEASSSVSNGTLALDSRPKQSIKSSRLFNDRQTQLSKPKHPLKSDEASSEVSMEKTKPKSLRKGPVKDQGEEDSSLSINNEDAKPQRVGTLPNYGFSFKCGERAERRKEFYNKLEERIQAKEVEKSNLQAKTKETQDAEIKKLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRPKSPKFGRKKTSANSESDGNTSSSSRLARLSLDEKVSESKGPNPVLQKKPLRRSLPSRLTSEKNNVSKSTTALTSSKATKDEKSSLSRAAKKNINISNATGEEKTDTIAATEKKNILSSETGDAVPLNVVPSDNKPSEEDSHVNVDIAVEENPLLPLAQEAVATEQ 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02610 476 MobiDBLite consensus disorder prediction 318 340 - -
Vimu1g02610 476 PANTHER PROTEIN WVD2-LIKE 4 95 427 IPR044833 GO:0008017
Vimu1g02610 476 Pfam Targeting protein for Xklp2 (TPX2) domain 231 302 IPR027329 -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 137 170 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 171 205 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 252 281 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 252 452 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 91 232 - -
Vimu1g02610 476 Coils Coil 246 273 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 17 39 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 399 432 - -
Vimu1g02610 476 MobiDBLite consensus disorder prediction 367 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02610 Vimu-Chr1 37667952 37673044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02610 - - gmx:100786958 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02610 1 37667952 37673044 Vimu1g02610 1 37667952 37673044 ECH
Vimu1g02610 1 37667952 37673044 Vimu10g02961 10 40583391 40589451 PCT