Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02540 ATGGAAAGCAGAACAGAGAACTCCAATGGCACTACAGTTCCCAAGCAATCAAAATCTCTGGATCTTAAAAGTCTATATAAATCAAAATTGTCTCTAAAAACTTCAAAAAAGAACATAAAGAGGATTAACAGTAGTAGTGGGGATGGTGATGAGAAGAGGAATAGAAAGAAGGCTAAAAGAGAAGTCTCTTTAAGTAGCTTAGAAAATGGTGATGGTAGCAGTGAGTTGAAGTTAGGGGTCAGTCAGAGATTTAATAGTAGTGTGTCAAATAAAGTTTCATTTGGAGTTTGTGGTGATGATTTTCACATTCCCAAGAGGAAGAGGAGTTTTATGCGGAAGAAAAAATCAGAGCCTGGTCAAGCATTAAATTTGGTGGAGCATCCCGATTGTAGAACTGGCTATGTCCATCCTGTGCCAAAGTTAGGTAGTGATGATGATTTGGGCAGTGGGGTTGAATCTTTCAAGACTAAGCATAAGAAAGAATTTGATGAATTTAATAAGGAAAATAGGAATAGTGATTCAAATTCAGTTCAAAATTTTAAGGAGAATGGGGATTGTGCATCTCATTCTCTTGTAAATATTGATGGTGGTGATTCTTCTTTGACAAAGTCACGAAGTAAGAATAGGAAACGTAAGACTTCAGCTTTAGATACAACTAAGGTTTCGAAGGAGGTTGAACCTTTGGTTTCGAGTTGTAAAATATCTGATGATTTGCAAGAAGATGAAGAGGAAAATCTTGAGGAGAATGCAGCTAGGATGCTATCTTCAAGGTTTGATCCAAGCTGTACTGGATTTTCGACCAAAGGTTCAAATGGTTTGTCATTTTTTCAATCTTCTAGTCAAAGTATTGTTAACCGTGATTTGAAGTTTCAATCAGGTTCAGAATCTGCATCAGCTGATACTGATAGCAGAGTTTTGAGGCCTAGGAAACAATATAAAAGCAAAGGTAATTCCAGGAAGAGGCGCCATTTTTATGAAATTCTTTTAGGTGATGTAGATGTATACTGGGTACTGAATCGGAGAATTAAAATTTTTTGGCCTTTAGACCAGAGATGGTATTATGGCCTTGTGGATGATTACGATGAAGGAAGCAAGCTTTACCATATCAAATATGATGATCGGGATGTAGAATGGGTTAATCTACATACTGAGAGATTCAAACTCTTGTTACTTCGTAGTGAAGTTCCAGGAAATGCAAAAGGTGAAAGAGCTTTTGCAAAACATAGAAGTTCTGATCAACAGAAGGGTAGCAAATCCAGAAAAGAAAGGCAAAGAACAGAACACAATACTGAGAATGATCACCATGGTGGGAGCAGTATGGACTCAGAACCTATAATTTCATGGTTGGCTCGATCTTCTCATCGGTTTATATCTTCTTTTCAAGGCATTAAGAAACAGAAAACTTCTGTTACACTTCCAAGTACAACGTCATCATTCTTATATGACGAACCTGTCACAACAAAGGGACAATTATGTAAGCATTCTCTGAAGGGTGTTGAAAATAATTTATCAAGTGATTATGGATCACAGGATAAATTAAGTGATGATTTTAGGATGAAGTCGTCATTGCAAAGTGCCACTTGCAATAAAGATGTAAAACAGCCTATTGTCTATTTCAGAAGGCGGATTCGAAAGCCTGCTCTAATACCCTCTCATATCTATGAAGAAAAGCATGCTATTAGAAGTGTATCTGGTTCTGTTTCCCTTGACCATATGTTTGGGGTTGAGAATATGAAGAATTCAAGTGATGACATGGATGAAGTTGAGGGCCCATTGTGCTTCACTTACAAGGCAGGAGTATCAAAAGTTTTTTGGGACATGGAATCATTGTTCAGATTTGGCTTAAATTTTCCAATGTGTTTCATGTTGAATAATCATTTTGAATCTGAAAATTTGTGGTTGCTTTATCCCCTTTTTTTGCTCCGGTATGGTACAGTTATGACCAAGTGGCCTAGAGTTTGTTTGGAGATGCTTTTTGTTGATAATGTGGTTGGGTTGAGATTTCTATTATTTGAAGGCTGCTTGAACATGGCTGTAGCCTTTGTCTTTTTTGTCCTTAGGGTATTTCACCAACCTGCCTGCGGAGGGAAGTATGTTGACTTGCAATTTCCATGTACATCTATTGGATTCAAGTTTTCTGGTCTTCATGTGATTAAGAAGCCGCTTGTTTTTGAGTTCTATAATTTCTCTGGAGTGAATAATTCTAAGTGGACGGACTTAGATTCAAAGCTTAAGAGGCATTGCCTTCTGAGTAAGAAGCTCCATCTTTCTGAATGCACATATGATAACATCCAGGCACTTCAAAATGGATCAAGTGGGTTGTCCACAGCTTCTGTCAGTGGGTCCTCTGCAGTCAAGGTCATGCAGAGGGGGAGGCCAGGGATTAACATCATGGGTATTTCCAAAGTGTCTACTCAAGCTGATATTCATCAGTATTCTGATGTTGGTGACAGGAAACTTCCTCCATTTACACTTTCTTTTGCTGCAGCACCTACATTTTTTCTTTCTTTCCATCTCAAGTTGCTGATGGAGCAGTCTGCAACTCATATTAGCTTTTCTGATCACACACCGGAATTTGATCAGGAAGACCCTAGTTTGGGGACCAATGGATGTACCAGCACCAATGGTTGCTCAAACAGGAATTCTGAAATCATCCCGAGGAAAGATATTGAGATCTTGTCCAACGGTGCTGCAGGTGATGGAGGGTCTTGTAATGACTCAGATCATCCGTCTACCTTCAATTATCAAATTCTCTCTCAAAGGCACCAGAACATTGGTCCTAGCAGTTTTGGTACTTCCATTTCTCATTGTTCTGAGAGGCTCGGCCCAACTCACTTACCCGAATGGCAATCACACCATATGGAGCAAGAGTTAGGCTCTTTACCTTTGAGTTCTTTAATTCATCAAGATAAGGATGATGATTGTTCTCATTCTTTTATTGGTGATCTCAGTATCCAAATTCCAGTTGATCAATTTGAGAAACCTGGTGGTGATGGTGATGGTGATTTACGTGATACTGAACACTCTCCTGATATCTCTTGGAATGGAGGCGTCATGCCAAGCTCTAATTTAACTGCACGTAGAAGTTCTTGGTATCGGAACCCGAATAGTTCCTCATTATTGAGATTTCAGTCTCATGTGTGGTCTGATGGAAAGGCTGATTCACTTTACAATGATTTTAACAGTGGACCTAAGAAACCACGCACACAAGTATCATACTCAGTGCCTTCTGCTGGTTATGAATTCAGTTCAAGGCAGAGAAACCATTATCAGAAAGGGCTTCCTCACAAACGAATTAGAAAAGCCAGTGAGAAGAAGTCATCAGATGTTGTTAGGGTCCCTGAAAAGAATTTTGAATGCTTATCTTGTGATGCAAATGTCTTGATTACTCTTGGTGATAAGGGTTGGAGAGAATCTGGGGCCCATATTGTACTAGAGCTGTTTGACCACAATGAGTGGAGACTTTCTGTGAAACTTTTAGGAATTACTCGGTATTCATACAAAGCACATCAGTTTCTGCAGCCTGGATCAACAAATCGATACACGCATGCAATGATGTGGAAAGGAGGGAAGGATTGGATCTTGGAATTTCCTGATAGGAGTCAGTGGACTCTTTTCAAGGAGATGCATGAGGAATGCTACAACCGTAACATCCGGGCTGCTTCAGTTAAAAATATACCTATTCCTGGTGTTCGTTTGATAGAAGAAAATGATGATAATGGATGTGAGGCAGCTTTTGTTCGGAGCTTTATGTACTTCCAACAGGTTGAAACAGATGTTGAGATGGCTCTGGATCCATCCCGTGTTTTGTATGACATGGATAGCGAAGATGAGCAATGGATTGCCAATGCTCAAAATTCTGTAAAAGATAACAGTGACTTGAGTTGGATTTCAGAGGAGATGTTTGAGAAGACATTGGACATGTTTGAAAAGGTGGCATATACTAAGAAGCGTGACCAGTTTACTTCTAATGAGATAGAGGAACTCGCTGTTGATGTTGGGCCTTTGTCTATTGTCAAAATCATATATGATCATTGGCAGGAGAGAAGGAAGAAGAGTGGAACGGCTTTAATACGGCAATTTCAGCCCCCTCTATGGGAAAGGTATCAGAAACAAGTGAGAGAGTGGGAGGTAGCCATGACAAAGAACAATACCCATTCCAATGCATGTGTGGACAAAGTTACAACTTTGGAGAAACCGGCCATGTTTGCTTTCTGTATGAAGCCTAGGGGTCTGGAATCCGTGAACAAGGGATTGAAGCATCGATCCCAAAAGAAGATTTCAGTATCTGGGCACGCAAACAGTAATCTAGATCAGGATGGCTTCCGTGAGTATTTGATTTACAAGCTTGGAAGAAGATATAATGCCTTACCTTTTGGCGATGAAAAGTTCCTATACCAAGGCCATTATTACGATTCTTTTGATGAATCACCATTGCCTCTGACCTCACCAAGGATGTTCGTACCACGTGATGCTGGCAGCTTGAAATACCATCCTACCAGTAAAGGATCGGGTTACAGAAATCATGTCCCAAAATTTCACCAGTCTAGATATGATGTGCCTCATAACAGGCATCACCTGCTTGCTGGCCCCAAGAGGCAAGGGATTGAACAGTTGGATACTTCTGTCCTTGAGGAGTTAAGGCTACGAGATGCGGTGGCTGAGGCTCGTATTAAACGGCACATGGCTAAGTTGAAGAGAGACAGGGCTAAAAGATTGCTATATAAAGCAGATGTAGCAATTCACAAGTCCATTACAGCTCTAATGATTGCAGAAGCAATGAATGCTTCTTTGGACTCACTTGGTGAAATTAAAGCTTCGGAGTACTAA 4830 0.4008 MESRTENSNGTTVPKQSKSLDLKSLYKSKLSLKTSKKNIKRINSSSGDGDEKRNRKKAKREVSLSSLENGDGSSELKLGVSQRFNSSVSNKVSFGVCGDDFHIPKRKRSFMRKKKSEPGQALNLVEHPDCRTGYVHPVPKLGSDDDLGSGVESFKTKHKKEFDEFNKENRNSDSNSVQNFKENGDCASHSLVNIDGGDSSLTKSRSKNRKRKTSALDTTKVSKEVEPLVSSCKISDDLQEDEEENLEENAARMLSSRFDPSCTGFSTKGSNGLSFFQSSSQSIVNRDLKFQSGSESASADTDSRVLRPRKQYKSKGNSRKRRHFYEILLGDVDVYWVLNRRIKIFWPLDQRWYYGLVDDYDEGSKLYHIKYDDRDVEWVNLHTERFKLLLLRSEVPGNAKGERAFAKHRSSDQQKGSKSRKERQRTEHNTENDHHGGSSMDSEPIISWLARSSHRFISSFQGIKKQKTSVTLPSTTSSFLYDEPVTTKGQLCKHSLKGVENNLSSDYGSQDKLSDDFRMKSSLQSATCNKDVKQPIVYFRRRIRKPALIPSHIYEEKHAIRSVSGSVSLDHMFGVENMKNSSDDMDEVEGPLCFTYKAGVSKVFWDMESLFRFGLNFPMCFMLNNHFESENLWLLYPLFLLRYGTVMTKWPRVCLEMLFVDNVVGLRFLLFEGCLNMAVAFVFFVLRVFHQPACGGKYVDLQFPCTSIGFKFSGLHVIKKPLVFEFYNFSGVNNSKWTDLDSKLKRHCLLSKKLHLSECTYDNIQALQNGSSGLSTASVSGSSAVKVMQRGRPGINIMGISKVSTQADIHQYSDVGDRKLPPFTLSFAAAPTFFLSFHLKLLMEQSATHISFSDHTPEFDQEDPSLGTNGCTSTNGCSNRNSEIIPRKDIEILSNGAAGDGGSCNDSDHPSTFNYQILSQRHQNIGPSSFGTSISHCSERLGPTHLPEWQSHHMEQELGSLPLSSLIHQDKDDDCSHSFIGDLSIQIPVDQFEKPGGDGDGDLRDTEHSPDISWNGGVMPSSNLTARRSSWYRNPNSSSLLRFQSHVWSDGKADSLYNDFNSGPKKPRTQVSYSVPSAGYEFSSRQRNHYQKGLPHKRIRKASEKKSSDVVRVPEKNFECLSCDANVLITLGDKGWRESGAHIVLELFDHNEWRLSVKLLGITRYSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWTLFKEMHEECYNRNIRAASVKNIPIPGVRLIEENDDNGCEAAFVRSFMYFQQVETDVEMALDPSRVLYDMDSEDEQWIANAQNSVKDNSDLSWISEEMFEKTLDMFEKVAYTKKRDQFTSNEIEELAVDVGPLSIVKIIYDHWQERRKKSGTALIRQFQPPLWERYQKQVREWEVAMTKNNTHSNACVDKVTTLEKPAMFAFCMKPRGLESVNKGLKHRSQKKISVSGHANSNLDQDGFREYLIYKLGRRYNALPFGDEKFLYQGHYYDSFDESPLPLTSPRMFVPRDAGSLKYHPTSKGSGYRNHVPKFHQSRYDVPHNRHHLLAGPKRQGIEQLDTSVLEELRLRDAVAEARIKRHMAKLKRDRAKRLLYKADVAIHKSITALMIAEAMNASLDSLGEIKASEY 1609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 401 438 - -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 1 20 - -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 36 76 - -
Vimu1g02540 1609 Pfam Enhancer of polycomb-like 1220 1311 IPR019542 -
Vimu1g02540 1609 Gene3D - 339 384 - -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 993 1019 - -
Vimu1g02540 1609 CDD Tudor_Agenet_AtEML-like 338 388 - -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 191 219 - -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 43 64 - -
Vimu1g02540 1609 SMART TUDOR_7 334 392 IPR002999 -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 294 314 - -
Vimu1g02540 1609 PANTHER ENHANCER OF POLYCOMB 1003 1599 IPR024943 GO:0006357|GO:0032777|GO:0035267
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 401 441 - -
Vimu1g02540 1609 MobiDBLite consensus disorder prediction 995 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02540 Vimu-Chr1 36760139 36765929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02540 - - gmx:100781778 2424.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02540 1 36760139 36765929 Vimu10g02876 10 39953429 39959561 PCT