Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02876 ATGGAAGATAGAGAGGAGAGCCCCCATGGTACTGCAATTCCCAAAAAATCGAGATCTTTGGATCTGAAGAGTTTGTATAAACCAAAACTGAGAAAAGAGAGTCCAGAGAAGGGCTTAAAGAGGAAAGGGAGTCATCCTGGGGGCGTTTATGAGAATACGAACAAGAAAAAGAAGACCAGAAAGGAAGTGTCTCTAAGTAGCTTAGAGAATGCTGATGCTGGCAACAAGAAGGTTGTCGATGAAGAATTTCAGAAAGGGCATACTTCTGGCAGGCAGGAATTGTGCGAACAAAAGTTGGAGCCAAAGCAGGGATCAGGTAGCAATACTTTGCTGAATAAAGGCTCGCTATGTTTTGATGAAAATGTTTACATTCCAAAGCGAAGGAGGGATTTTGTGGGGAGAAGGAAAATTGAAGTAGGCTTGGCTCCGAAGTTGGCTGGAGAGTCTAGTAATACAGGTGACCATGGTGATCAGATACTTAAGTTAAGTAGTGATGATTTGGACAGGGGGGTTGAATCGTCAAAGATCAAACACAAACGAGATTTTGATGAGTTTAAGGGAACTAAGAGTAAATCTGCTGTAAAGAGTGGTGATTCCTCCTCAAAGAAGTCACTGAAGAAGGACAGAAAGCTAAAGGCATTTGCTCCAGATAGAAATAGGGTTGCAACGGAGGTTAAGCCTCGTATTGATAGTAGTAAAACATCTGATTACAAGAAAAAGGCTGTGTCTCCGGATAGGGGCAGGGTTGCCAAGGAGGCTCGACCTGTGATTGATGATAGTAAAACATCCGACTACAAGCAAAAGTCTTTGGCTCCAGATAGAAATAAAGTTGCCAAAGAGGTTAAGCCTCTGATTGATACTAATAAAATATCTGATTATATGCGGGAAGATGAGGAGGAGAATCTTGAAGAGAATGCAGCAAGGATGCTGTCTTCACGATTTGATCCAAATTATGCCGGCTTTTGTTCAAGTAGTAAGCCCTCTACATTGCCATCATCAAATGGGTTGTCCTTTTTGATCTCTTCTAGTCGGAATATTGATAGTTGTGCGTCTAAGTCTCATTCAGGCTCAGAATCAGCATCAGTTGATACTGCTGGCAGAGTCTTGAGACCGAGGAAACAATACAATGAAAAAGGTCGTTCCCGCAAGAGGCGGCACTTTTATGAAATTTCATTAGGTGACTTAGATAAACATTGGATACTGAACCAGAGAATTAAGGTGTTTTGGCCTTTGGACCAAATTTGGTATCATGGTCTTGTCGATGATTATAACAAAGAAACAAAGTGTCATCATGTCAAATATGATGATCGAGAAGAAGAATGGATTAATCTCGAAACGGAGAGGTTCAAACTCCTGCTACTTCCAAGTGAAGTTCCTGGAAAAGCAGGGAAAAAAAGAGCAGTAAGGAAAAATAAAAGCCCTGACCAGCAAAAGGGAAGCCTGTCCAGCAAAGAAAGGCAAATAAGAGATGTGATTACTGAGAATAATAGCTGTGGTGAAAGCTGTATGGACACAGAGCCTATAATCTCTTGGTTGGCTCGATCTTCCCATCGGTTTAAATCTTCTGCCTTTAATGGGGTTAAGAGAAAGAAAAATCCTATTACACTTCCAAGTACAGCCTCATCATTATGCAACGAAGCTGTAAAAACAGGGAGGGCCTTAGTTGAGAGTTCCCCGAGGGATGGGAAAAACAGCTTTTCCAGAGATTCTTTATCAGAAGATAAATTAGATGATAACTTTGGGGGTAAGTCTCCATTGCAAAGCTTCAATTGCCCTAAAGATGACAAACGACCTATTGTCTATTTTAGAAGGCGGTTTCGTAAGCCAACCCCAATGTTACCTCAAATTTCTCTAAATAAACATGTTAACACAACTGCATCTTGTTCCATTTCTTTCGATCCTGTGGCTGGTGGGCCTATGGATGTAAAAGGGTCCAATGCTGGGAGGGGTGAGATGGAGGGACCATTGTGTTACACACATAATGGGGGGGTTTTAAAAATTTTCTTGGAAACTGGTTCAGCAACATTCAAGTTTGGCTTAAAGTATCCAACACAATCTGTGTTGAATGGCTCGTCCAAATTAGAGAATTTGTGGTTGTTCCGTGCTATTCTGTTACTTCAGTATGGTACAGTTATGAGCCTGTGGCCAAGAGTTCATTTGGAGATGCTTTTTGTTGACAATGTGGCTGGACTGAGGTTTCTCTTATTTGAAGGCTGCTTGATGATGGCTGCAGCCTTTGTCTTTTGTGTCCTTCGGTTATTTCATCAACCTGCTGAACAGGGGAAGTATATTGACGTGCAGTTGCCTGCTACATCGATCCGATTCAGGTTTTCTAGTGTTTATGGTATAAGGAAGCCTCTTGTGTTCACATTTTACAATTTCTCCAGAGTGAAGAATTCAAAATGGTTGTATTTAGATTCAAAACTTCAGAGACATTGCTTACTCGGTAAGCAGCTCCATCTCTCTGAATGCACATATGATAACATCCAGGCACTTCAAAATCAATCTAGTGAGTATCCAATTACGTCCATCAGAGGGAACCCCTTAGTCAAGGTCATGCAGAAGAGGATTAGGCCAGGGATTAACATTATGGGTGTTTCCAGAGAGTTTTCTCAGGCTGATACCAGTGAATATTCTGACTCTGGCAAGAGGAAGATTCCTCCATTTTCACTTTCTTTTGCTGCTGCACCTACATTTTTTATTAGTTTACATCTGAAGTTGCTGATGGAAAAGTCAGTAGCTCATATTAGCTTTTGTGATCATGCACTGGTAGATGATGAGGAAGACTTTGGTCCGATGACAGATGACTGCTCTAGCATCGATGATTGCTCTAACCGGAATGCAGAATTTAATGTGAAGAAAAATATGATTACTTTGTCAAAGGATGCGGTGCCTGATGGATTGACTTGTGCCAAACCAGATTTATTAATTAGTCCATCTAATTGCAGTGATCAAGTTCTCTCCCAAAATTACGAGAATATTGATCGTAGTGCTGATAGAACTTCCATGTTGGATTGTTCTGAGAGGCATCGCAATGTTCAGTTACCAGACTGGCAAACATGTCACTTTGACCATTCTTTTCCTTCAAATTCTTTATCTGATAAGATTAAAGCCAATGATGATTCTCATTCTTTCCTGTGCGATTTGAGTGTACAAATACCTTCTGTTGATCAATTTGAGAAACCTTGTGATGGTGATTTGCGTGATGCTCAACACTCTTCTGATTTTTCGTGGAATGCAAATGGAGGTGTCAGTCTCAGCCCCAACCCAACAGCTCCCAGAAGTTCTTGGCACCGGAACAGGAATAATTCCTCATCTTTTGGATTCCAGTCCCATGGGTGGTCTGATGTGAAGGGTGATTCTCTTCACAATGGTTTAAGCAGTGGACCTAAGAAACCAAGGACACAAGTACATTATTCAGTACCTATTTCTGGGTATGATTACAATTCAAGGCACAGAAGCCATTATCAGAGACAGAGAGGGTTGCCTCACAAGCGAATTAGAAAGGCTAATGAGAAGAAATCATTGGATGTTGCTAGGAGTCCTGAAAAGAATCTGGAGGCCTTATCGTGTGGTGCTAATGTGTTGATTACCCTTGGTGATAAGGGGTGGAGAGAATCCGGTGCTCGAGTTGTACTAGAATTGTTTGATCATAACGAGTGGAAACTTTCTGTAAAACTTGCAGGTATTACAAGGTATTCATACAAAGCACATCAGTTTCTGCAGACTGGATCAACAAATCGTTACACTCATGCTATGATGTGGAAAGGAGGGAAGGATTGGATCTTAGAATTTCCTGATCGGAGTCAGTGGGCTGTTTTCAAGGAGATGCACGAGGAATGCTACAACCAGAACATCCGTGCTGCTTCAGTTAAAAATATACCTATTCCTGGTGTTGTCTTGATAGAAGAAAATTATGATAATGAAGCTGAAGCTACTTTTGTTCGTGGCTCTAAATATTTTCGACAAGTTGAAACAGATGTAGAGATGGCTCTGAATCCATTGCATGTATTGTATGATTTGGATAGTGAAGATGAGCAGTGGATTTTGACTATTCATAATTCTGAGAAAGATAATGGTTTCATGGATGGGATCTCCAATGAGATGTTTGAGAAAACAGTGGACATGTTTGAGAAGGCTGCATATGCTCAGCAGCGTGATCATTTTACTCCAACTGAAATAGAGGAACTGACTGTTGATGTTGGGCCCTTCTGTGTAACCAAAATCATTTATGAATATTGGCAGCAGAAAAGGCAGAAGAAGGGAATGGCGTTAATACGACATTTTCAGGATGGGGGATATAGAAGTGAAGGGGAAGGGATTTTAATATGTGCGGCAGTGGATTATTTTTTTCTTATTTGCCCTAATTGTACCTATCAGCAAGCTGAAGGCCGGCCGAATCCACCTCTATGGGAAAGATATCAACATGAATTGAGGGAGTGGGAAGTTGCCGTGACGAAGAATAATATTCCCATTTCTAATGGGTGCTTGGACAAGGGTGTGGCTTTGGAGAAGCCAGCTATGTTTGCTTTCTGTTTGAAACCAAGAGGTTTGGAAGTACCAAACAAAGGATCAAAACATCGATCACAAAAGAAAATTTCGGTCTCAGGCCATTCAAACAATGTTCTGTATGAACAGGATGGATTCCATCCTTACGGACGAAGATTCAATGGGTTGGCATATGGTGATGAAAAGTTTGCATTCCCAGGGCATAATTATGATTCGGTGGATGATTCCCCATTGCCCCAAATCTCTCCGATATTCTCACCCCGAGACGTTGGCAGCATGGGATATTATTCTATAAACAACCGTTATGATAGAAATCATATACCCAAATATAACAGACACAAGTCAAGGAAATTTGGATCATTTGGGTTTCATAATGATTCCTATAATCAGAGAATTTCATCTTCAGGGAAGAGAAATGGGGATGCTAGGTGGAATGTGGGCTACTATGACTTGGCAGGCCACAGGCAGTACCTGTTGGATGGACCTCAGAGACATGGGATTGATCAAACTGATGGTCCAGATCTCTATGAACTTAGAGTGCGTGATGCGTCTGGAGCTGCTCAGCATGCAGTTAACATAGCTAGAATGAAGAGAGAGAGAGCTCAGAGATTGCTTTACAGAGCGGATCTTGCAATTCACAAGGCTGTGGTTGCTCTTGTGACCGCTGAAGCAATGAAAGCTTCTGAAGATTCCAATGTAGACTCAGCAGTGAGTTTACCAGACAAAGCCATTGGTTCGACTTTGTTAACGGCTGTGGCCTATTGTTATTATACTGAACTTCAAGCCGTGAGAGCTGAAATCAATGGGATGGATGCAACTCTTTTGCACGGTTTGCGGGCACCTTCCCCAGCTATGCCTAGTTCAGTAGTGTTGTTGCGCTGA 5391 0.4162 MEDREESPHGTAIPKKSRSLDLKSLYKPKLRKESPEKGLKRKGSHPGGVYENTNKKKKTRKEVSLSSLENADAGNKKVVDEEFQKGHTSGRQELCEQKLEPKQGSGSNTLLNKGSLCFDENVYIPKRRRDFVGRRKIEVGLAPKLAGESSNTGDHGDQILKLSSDDLDRGVESSKIKHKRDFDEFKGTKSKSAVKSGDSSSKKSLKKDRKLKAFAPDRNRVATEVKPRIDSSKTSDYKKKAVSPDRGRVAKEARPVIDDSKTSDYKQKSLAPDRNKVAKEVKPLIDTNKISDYMREDEEENLEENAARMLSSRFDPNYAGFCSSSKPSTLPSSNGLSFLISSSRNIDSCASKSHSGSESASVDTAGRVLRPRKQYNEKGRSRKRRHFYEISLGDLDKHWILNQRIKVFWPLDQIWYHGLVDDYNKETKCHHVKYDDREEEWINLETERFKLLLLPSEVPGKAGKKRAVRKNKSPDQQKGSLSSKERQIRDVITENNSCGESCMDTEPIISWLARSSHRFKSSAFNGVKRKKNPITLPSTASSLCNEAVKTGRALVESSPRDGKNSFSRDSLSEDKLDDNFGGKSPLQSFNCPKDDKRPIVYFRRRFRKPTPMLPQISLNKHVNTTASCSISFDPVAGGPMDVKGSNAGRGEMEGPLCYTHNGGVLKIFLETGSATFKFGLKYPTQSVLNGSSKLENLWLFRAILLLQYGTVMSLWPRVHLEMLFVDNVAGLRFLLFEGCLMMAAAFVFCVLRLFHQPAEQGKYIDVQLPATSIRFRFSSVYGIRKPLVFTFYNFSRVKNSKWLYLDSKLQRHCLLGKQLHLSECTYDNIQALQNQSSEYPITSIRGNPLVKVMQKRIRPGINIMGVSREFSQADTSEYSDSGKRKIPPFSLSFAAAPTFFISLHLKLLMEKSVAHISFCDHALVDDEEDFGPMTDDCSSIDDCSNRNAEFNVKKNMITLSKDAVPDGLTCAKPDLLISPSNCSDQVLSQNYENIDRSADRTSMLDCSERHRNVQLPDWQTCHFDHSFPSNSLSDKIKANDDSHSFLCDLSVQIPSVDQFEKPCDGDLRDAQHSSDFSWNANGGVSLSPNPTAPRSSWHRNRNNSSSFGFQSHGWSDVKGDSLHNGLSSGPKKPRTQVHYSVPISGYDYNSRHRSHYQRQRGLPHKRIRKANEKKSLDVARSPEKNLEALSCGANVLITLGDKGWRESGARVVLELFDHNEWKLSVKLAGITRYSYKAHQFLQTGSTNRYTHAMMWKGGKDWILEFPDRSQWAVFKEMHEECYNQNIRAASVKNIPIPGVVLIEENYDNEAEATFVRGSKYFRQVETDVEMALNPLHVLYDLDSEDEQWILTIHNSEKDNGFMDGISNEMFEKTVDMFEKAAYAQQRDHFTPTEIEELTVDVGPFCVTKIIYEYWQQKRQKKGMALIRHFQDGGYRSEGEGILICAAVDYFFLICPNCTYQQAEGRPNPPLWERYQHELREWEVAVTKNNIPISNGCLDKGVALEKPAMFAFCLKPRGLEVPNKGSKHRSQKKISVSGHSNNVLYEQDGFHPYGRRFNGLAYGDEKFAFPGHNYDSVDDSPLPQISPIFSPRDVGSMGYYSINNRYDRNHIPKYNRHKSRKFGSFGFHNDSYNQRISSSGKRNGDARWNVGYYDLAGHRQYLLDGPQRHGIDQTDGPDLYELRVRDASGAAQHAVNIARMKRERAQRLLYRADLAIHKAVVALVTAEAMKASEDSNVDSAVSLPDKAIGSTLLTAVAYCYYTELQAVRAEINGMDATLLHGLRAPSPAMPSSVVLLR 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 74 98 - -
Vimu10g02876 1796 Pfam Enhancer of polycomb-like 1285 1379 IPR019542 -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 554 589 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 1 113 - -
Vimu10g02876 1796 SMART TUDOR_7 397 455 IPR002999 -
Vimu10g02876 1796 CDD Tudor_Agenet_AtEML-like 401 451 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 1078 1103 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 350 380 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 159 191 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 562 580 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 200 250 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 140 250 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 462 486 - -
Vimu10g02876 1796 PANTHER ENHANCER OF POLYCOMB 1081 1740 IPR024943 GO:0006357|GO:0032777|GO:0035267
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 20 44 - -
Vimu10g02876 1796 MobiDBLite consensus disorder prediction 51 65 - -
Vimu10g02876 1796 Gene3D - 398 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02876 Vimu-Chr10 39953429 39959561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02876 - - vun:114163981 3233.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02876 10 39953429 39959561 Vimu10g02876 10 39953429 39959561 ECH
Vimu1g02540 1 36760139 36765929 Vimu10g02876 10 39953429 39959561 PCT