Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02530 ATGCTGAGGAAGAGAAACGGGTCAATCTTGAAAGATCAACACAAAGCTGGCAAGATGGTAATTTCTGAAGCCAATTTTGAGTCATATTCTCAGTCTCATGCTTTGGGGAGCAATGTCAAGAGCAACTCAATTTTCAATGCCCCTCTTCTGTTTGTGGGAATGGGTCCTAAAGGCTTGTTGGATTCTGATTCAGTTAAGAGCCCCACTTCCCCACTAGATGTTTCATTCTTTTCAAATTTAAGTAATCCCTTTAGAACCCTAAGTTCATTGTCCAATGAGGGGCAACAAAGGAGCTGGGACTGTGCCAAAGTAGGTCTAAGTATTATAGATTCTTTGGAAGAATGTTCCAAGTTTTCTAGAAAAATTCTCCAAGCATCGGAGAGCAAGAAGACTGGTCTGAGTCCCCAAATGATTACTAAAGCCCCAAATTGTAAACCTTATATGGATATGGATTATACTCAGGCATCTAAGTCTTTACCCAAAGATTTTTGCAAGATCCATTGTACTCAAAATGGTTATATTTTCCCAAAAGGTGAGTCCACTGTTCTTTTTGAGATTGGAGAGACCCCACCACAACATGAGTCCTTTGAGAAAACTGTGTCTGTCTCATTGGACTCTTGCAGTCCTATTAGGAATCTGTCTGGTTTAACTGGTCCCAACTTCGATTCTGACCCTGAGAATCTTGCTTTCAAACACAAGTGCTCTCCTCCTCATTTTATTGGAGGAAGCCATGATAACACACAAGTTTTGCAACCTGCTGACTTAAATTCAAACCCTGTGGCTGCAGTATCTTCTAAGGAATTTATTAAGTCTCTATCGGCCAGTGAGATTGAACTCTCTGAGGATTACACCTGTGTGATATCTCATGGTCCTAATCCTAAAACAACACATATTTTCTGCGACTGCATTTTGGAAACTCATGCAACTGATGTAGGAAAACATAACAAGAATGGAGAGGATGGAAAGGAATCATCTCTTTTCAGTGTTAACAGCATGCATATTCCAAACCATTTTCCATCTGAAGACTTCTTAAGTTTCTGTCACCATTGTAACAAGAAGTTGGAAGAGGGAAAAGACATTTACATCTATAGAGGTGAAAAGGCATTTTGCAGTTTGAGCTGCCGGGAAGTAGAGATCATGCTTGATGAGGAGCTAGAAAAATCTGATTCATCACCTGAAAATTCTCACCAGGGAGAATTTGAGGGTGAACTTTTTTGA 1218 0.4007 MLRKRNGSILKDQHKAGKMVISEANFESYSQSHALGSNVKSNSIFNAPLLFVGMGPKGLLDSDSVKSPTSPLDVSFFSNLSNPFRTLSSLSNEGQQRSWDCAKVGLSIIDSLEECSKFSRKILQASESKKTGLSPQMITKAPNCKPYMDMDYTQASKSLPKDFCKIHCTQNGYIFPKGESTVLFEIGETPPQHESFEKTVSVSLDSCSPIRNLSGLTGPNFDSDPENLAFKHKCSPPHFIGGSHDNTQVLQPADLNSNPVAAVSSKEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFCDCILETHATDVGKHNKNGEDGKESSLFSVNSMHIPNHFPSEDFLSFCHHCNKKLEEGKDIYIYRGEKAFCSLSCREVEIMLDEELEKSDSSPENSHQGEFEGELF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02530 405 ProSiteProfiles Zinc finger FLZ-type profile. 342 386 IPR007650 -
Vimu1g02530 405 PANTHER FCS-LIKE ZINC FINGER 11 1 405 IPR044585 -
Vimu1g02530 405 MobiDBLite consensus disorder prediction 384 405 - -
Vimu1g02530 405 Pfam zinc-finger of the FCS-type, C2-C2 338 384 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02530 Vimu-Chr1 36643868 36645179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02530 - - vum:124831358 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02530 1 36643868 36645179 Vimu10g02871 10 39913386 39914495 PCT