Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02513 ATGGGGGATGAGAAAGCTGAGAAGAAAGAAAGTAGTGCGGTGAAGGAGAATATCGAGAACAATGGGGAGAAGACGAAGGAAGAGAAGAAGACAAAGAAGAAGGGATTTATTTCGCGAATATGGAACGCGATATTCAGGTCCAACAACGACGATTTCGAGAAGCGGCTTCAGTATATCACCAAAGAAGAAAACGCCGTCGTTGTGAGAATGAGCAACAGATCTCGCTCTTGGAGGCGAACCTCTCGCCAGCTTATTTTATTTTCTGTTCTGTTCGAGTCTCTGATGATGACGTTGACATGGTTCGAATTGTTTTTGAGATGTGCTTTTGGAGGCTTCGGACATTTTTTATGTTGTGGAGACTTTTTGATGCTGCTGGAAATTGCTCTTGGGATGTGGAGATTTCAAAACCTTGATGTTGTGGAGGGTCCAAAAACCTTGACATTGCGAGAATTCGTGGCTGCAATTGTGGTTGCTATTGCGGTTGTAATATGGTTTTGGAGACTTCCAAGATTTGATGTTGTGGAGACTTCAAAGACCTCGACGTTGTTAAAAAGAGTGGCTGCAATTTCTAGGTACTTGGGTATTATGAGATGCCTAAGTTCCACATTCAGTAAGATGAGATTCTCCGTCTGGTATTTAAGTTCTCCCTTAATAGCTAACTTTTCAAATGTTTATCAATTGGTATTTGAGTTATTGGTGTCTGGAAAAGGAATACTTGCAGATCGTATTCATCTAGCTGTTGAGAGCGGGTTCTCCAAATTCTGGGGTGCTTATCACGTCATTGCTGTAGGTTATGCTATTATGACGACAAGATCAATGGATATGAATTGGAAAATGCGGGCAATTCGAGTGTTGCCAATGTTTCTTTTGCCTGCCTTGTCAACTGCTACATACTCAACATTTAAAATTCTTGAAAGGCTTAGAGCTGAAAGGAAAGCGAAAATTGATGAGCTCAAAGAGAAGACAAACTATTACATTACTCAGCAACTCATTCAGAGATATGACACGGATCCAGCAGCAAAAGCAGCAGCTGCAACTGTTTTAGCATCTAAGTTGGGTTCAGATTCTGGTTTGAACGTGTATGTGGAAGATGACTCTTCTGCTGCTCCAACTGGGAAGACCAAGGATGTTGAACTTGTGCAGTCAAGTGGTCTTCGAAATCGCAAGCAAGTGAACTCTAGATCCACTAGTCCGGGGACAAAGACAACAAATTATTCTGATGAACAATTAGTTGGTTCTGGGAAAATTAATCAAACTCAAACTCCTGAGCATAATGAGCTTGTAGTTGTTGAACATCATCCTCAAAGTTCAGCAATGAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACCCAGTCTTATGCACTCATATGTGGTAATTGCCATATGCATAATGGCCTTTCTCGGAAGGAGGATTTCCCATTCATTACTTATTACTGCCCACACTGTCACGCCTTGAACAAACCAAAGCATTCGGATGAGCATATATCTCTACCAAACACTGATTCTCCAAAAGCAGATGATGGCAAAGAAGTCCAAAAAGCTGGTGCTTCTGACAGCTTAATCGCAAGCGATAATCCTGTAAAAGCGACCCCTGAGATTGAGGAAGTAGCTGACCGGGCTATTTCAGGTGATGAAAGCTAG 1665 0.421 MGDEKAEKKESSAVKENIENNGEKTKEEKKTKKKGFISRIWNAIFRSNNDDFEKRLQYITKEENAVVVRMSNRSRSWRRTSRQLILFSVLFESLMMTLTWFELFLRCAFGGFGHFLCCGDFLMLLEIALGMWRFQNLDVVEGPKTLTLREFVAAIVVAIAVVIWFWRLPRFDVVETSKTSTLLKRVAAISRYLGIMRCLSSTFSKMRFSVWYLSSPLIANFSNVYQLVFELLVSGKGILADRIHLAVESGFSKFWGAYHVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSTATYSTFKILERLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGSDSGLNVYVEDDSSAAPTGKTKDVELVQSSGLRNRKQVNSRSTSPGTKTTNYSDEQLVGSGKINQTQTPEHNELVVVEHHPQSSAMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLSRKEDFPFITYYCPHCHALNKPKHSDEHISLPNTDSPKADDGKEVQKAGASDSLIASDNPVKATPEIEEVADRAISGDES 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02513 554 Coils Coil 301 324 - -
Vimu1g02513 554 MobiDBLite consensus disorder prediction 365 408 - -
Vimu1g02513 554 MobiDBLite consensus disorder prediction 376 408 - -
Vimu1g02513 554 MobiDBLite consensus disorder prediction 498 521 - -
Vimu1g02513 554 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 30 170 IPR040115 GO:0071786
Vimu1g02513 554 MobiDBLite consensus disorder prediction 1 30 - -
Vimu1g02513 554 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 444 494 IPR019273 -
Vimu1g02513 554 MobiDBLite consensus disorder prediction 539 554 - -
Vimu1g02513 554 MobiDBLite consensus disorder prediction 498 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02513 Vimu-Chr1 36457814 36463513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02513 K23292 - gmx:100815496 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02513 1 36457814 36463513 Vimu10g02850 10 39774518 39781029 PCT