Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu1g02436 | ATGGAGCAAGATTCCCATCATCACCATAGATGGGAAGGCAAGGTATCAGCGAGGGTGCGAAACGTCACCAAAGCACAAGCTTGGCCTCTGGTGAAAGACTTCTTCAATATCCACAAGCTCTTCCCCACGCTCGTCACGTGCTACGGACTTCACGGATCTAACGGTGATCCTGGCTGCATAAGATACTGCGCCGGGTTCTCCATCCCATCCAACGGTCCAGAAAGTGTGAGCTGGTCCAAGGAGAGGCTGATTGCCGTTGATGATGTTGACTTCTGGCTCAAGTATGAGATAGTGGAGAGCAACATCGGGTACAATTCGTATGAATCTACGATGAAGGTCCTGAGCGATAATGATGATGAGTCAAATGGATGTATGTTGGAATGGTCCTTTGTCGTTGATCCTGTGCAAGGGTTGGAGCTTGAGGAACTGGTTAGGAAGTACCGTGTGGCAGTTCAGGTTATCGGCCAGAAAATCGAGGAAGAAATTCAAAAGTTTGGTAAGTGTAATTTTGAAGAATTGACCATTTTGATTGATATATTTGGTTTGTGA | 549 | 0.4663 | MEQDSHHHHRWEGKVSARVRNVTKAQAWPLVKDFFNIHKLFPTLVTCYGLHGSNGDPGCIRYCAGFSIPSNGPESVSWSKERLIAVDDVDFWLKYEIVESNIGYNSYESTMKVLSDNDDESNGCMLEWSFVVDPVQGLELEELVRKYRVAVQVIGQKIEEEIQKFGKCNFEELTILIDIFGL | 182 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu1g02436 | 182 | PANTHER | LACHRYMATORY-FACTOR SYNTHASE | 1 | 163 | - | - | |
| Vimu1g02436 | 182 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 15 | 147 | IPR019587 | - | |
| Vimu1g02436 | 182 | CDD | PYR_PYL_RCAR_like | 11 | 144 | - | - | |
| Vimu1g02436 | 182 | Gene3D | - | 2 | 167 | IPR023393 | - | |
| Vimu1g02436 | 182 | SUPERFAMILY | Bet v1-like | 20 | 149 | - | - | |
| Vimu1g02436 | 182 | FunFam | Lachrymatory-factor synthase | 3 | 163 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu1g02436 | - | - | pvu:PHAVU_001G063200g | 279.641 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu1g02436 | 1 | 35258329 | 35258877 | Vimu10g02710 | 10 | 38518887 | 38520653 | PCT |