Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02710 ATGACAGAGGAATCTACCCCCAAATGGGAAGGTAAAGCCATGGCTGAGCTACCAGCCATCGTTCCACAACTTATATGGGAGGTTCTGGAAGATTTCTGCAACGTACACAAGTGGCTTCCCATAGAAACATCTTACCATGTAGAGGGAGTTTCAGGTCAACCTGGTCTCATCCGCTACTGTGCTCTCACTGTTGAAGAAGAAGAAGGGGTTGGTGATGATGCTGAGAAGACAACAACCATGAAATGGGCCAAAGAGAAGCTGCTTGAGATAGATCCTGTACAACGTTGTTTGACCTACGAAGTTGGTGAAAACAACTTGGGATTTAAGTCCTATGTGGCCACAATCAAGGTCTTCCCCATGAACCAGGATGGATCCAAGATCGAGTGGAGCTTTGTCTGTGATCCGGTTCAAGGCTGGAGGTTCCAAGATTTGAACTCGCTTATTGAGTCTTATCTGGAGTTCATGGCCAAGAAGATTGAGCTTGCATGTAACACAAACTAG 501 0.4611 MTEESTPKWEGKAMAELPAIVPQLIWEVLEDFCNVHKWLPIETSYHVEGVSGQPGLIRYCALTVEEEEGVGDDAEKTTTMKWAKEKLLEIDPVQRCLTYEVGENNLGFKSYVATIKVFPMNQDGSKIEWSFVCDPVQGWRFQDLNSLIESYLEFMAKKIELACNTN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02710 166 CDD PYR_PYL_RCAR_like 22 160 - -
Vimu10g02710 166 PANTHER LACHRYMATORY-FACTOR SYNTHASE 1 163 - -
Vimu10g02710 166 Pfam Polyketide cyclase / dehydrase and lipid transport 22 155 IPR019587 -
Vimu10g02710 166 SUPERFAMILY Bet v1-like 22 160 - -
Vimu10g02710 166 Gene3D - 2 165 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02710 Vimu-Chr10 38518887 38520653 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02710 - - vun:114162606 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02710 10 38518887 38520653 Vimu10g02710 10 38518887 38520653 ECH
Vimu1g02436 1 35258329 35258877 Vimu10g02710 10 38518887 38520653 PCT