Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02431 ATGAAGCGCATGCAACAATTTGGAGTGAGGTTTGTGCCCTCAATAATAGTGATACCCAATGTTTATACTGTCTTTGCAAGTAATTCTAAAAATAATTTAAAATGTGAGCATTGCCATTGCTATGGTCATACCATTTGGAAACTGCATGGGAAACCTCTTCATCCAACCAATACTGCTAGGCATCTATTACTGAGTAATTTGCTGCTCATGGGGATTAGACAGGAGGTTATTGTTGACTTGGTGGAGCAGTGTCGAACTTACAAGCAGAGGGTGGTACACCTTGTCAACTCAACTTCCGATGAATCACTGCTATGCCAAGGACTGGCCCTGAATGATGATCTGCAGCGAGTACTGGCCAAGCACGAATCTATTTCTTCGGGAACTTCTGCCCAAAACCAAAATCACACAGAAAATTCAAAACCTGCCCTTCCTGGAGCACTTGTAGATATAGATACTCCTTTGGTTGATACTGGGGATACTAGCAAACAAACTAAAGAGAGGTAA 504 0.4206 MKRMQQFGVRFVPSIIVIPNVYTVFASNSKNNLKCEHCHCYGHTIWKLHGKPLHPTNTARHLLLSNLLLMGIRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESISSGTSAQNQNHTENSKPALPGALVDIDTPLVDTGDTSKQTKER 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02431 167 ProSiteProfiles GAT domain profile. 36 126 IPR004152 GO:0035091|GO:0043130
Vimu1g02431 167 PANTHER TOM1-LIKE PROTEIN 70 166 IPR044836 GO:0035091|GO:0043130|GO:0043328
Vimu1g02431 167 CDD GAT_GGA-like_plant 70 124 - -
Vimu1g02431 167 Pfam GAT domain 73 126 IPR004152 GO:0035091|GO:0043130
Vimu1g02431 167 SUPERFAMILY GAT-like domain 73 127 - -
Vimu1g02431 167 MobiDBLite consensus disorder prediction 125 140 - -
Vimu1g02431 167 MobiDBLite consensus disorder prediction 125 167 - -
Vimu1g02431 167 Gene3D - 71 134 IPR038425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02431 Vimu-Chr1 35208762 35209948 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02431 - - gmx:100809022 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02431 1 35208762 35209948 Vimu1g02431 1 35208762 35209948 ECH
Vimu10g02757 10 38940359 38944736 Vimu1g02431 1 35208762 35209948 PCT