Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01929 ATGGATCTTCCTCCACAAATCGATTGTTACATCAAGCAATCCATCGACCACATTGTGGGCCTTCCCATATCGGATAAAACCCTCCTCACAAAGCTTCAAGCCTCCGAAGAGTTGCGGCGCCAACTCCACCAGCAACGCGTCTTCCTCCTCACCAAACTCAAGGAGAAAGACGATCTCATCGAACTCGCTAGAAATGAAGCAACCATGAACGCCCAAGCCATGAAGAGGTTCGTTGAGGAGAATCAGAAGTTGGCGGCGGAGTGTGAGAGACTGGTGGAGCAGTGCGTGAAATTGGAACGAGAATGCGCCCTCTACGATCATGACCGGGAAGCGTTGATGGAGTTTGGGAACGAAGCTGATGAACGCGCGCAGGTGGCTCTCGCTCGGGTTTGCGAATTGGAACGAGATTTGTGTCTGTTGGGGCGTCAATTGAACCAATACAAACAGCAAAACGAGTCGGTTGATTCTTCTTCCGGAACACTCGATGAAGAAAAATTACTTGACTCCCTTTTGGCAACAGTTACTACTGCGGATGAGTCTTCAACATTTGCATTCTTGAATTCAAATAGTGAAAATGATCAGTGTAAGAAGTTGCTGACAACCTGGAATTGTTTGAAGCCATCAACACAGAGAGTTTTGGGTCTTGTTGCTGAAGTCAAATCTCTAGAAAATGATAAAGAAAATCTAAGGGTTAACCTTCACAGAGCTGAAGATGAGGTCAAATTATTGTTTGAGGAAAATAGCGTTTTGCAGAACGAGAATAAAAGATTGGCCAAACGATGCATGGAAAGGAGCCATAGCGGTTCTGATAGGAAACATGGCCATACCCATACCCATACCGGCAGCGAATCTGTGAAGTCAAACAAGAGAAAGTCTAGTCTCAAGACAAGTAGCCCAATCCCAATGGGGAGAAAGATTGATTTTGAAGATGTAGTAGACTCAGCAAGAACACCCTTGTCACCTTTGGAAAATAAACTCTCAGAATTGTAG 990 0.4525 MDLPPQIDCYIKQSIDHIVGLPISDKTLLTKLQASEELRRQLHQQRVFLLTKLKEKDDLIELARNEATMNAQAMKRFVEENQKLAAECERLVEQCVKLERECALYDHDREALMEFGNEADERAQVALARVCELERDLCLLGRQLNQYKQQNESVDSSSGTLDEEKLLDSLLATVTTADESSTFAFLNSNSENDQCKKLLTTWNCLKPSTQRVLGLVAEVKSLENDKENLRVNLHRAEDEVKLLFEENSVLQNENKRLAKRCMERSHSGSDRKHGHTHTHTGSESVKSNKRKSSLKTSSPIPMGRKIDFEDVVDSARTPLSPLENKLSEL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01929 329 MobiDBLite consensus disorder prediction 260 329 - -
Vimu1g01929 329 Coils Coil 212 260 - -
Vimu1g01929 329 Coils Coil 74 101 - -
Vimu1g01929 329 PANTHER EARLY ENDOSOME ANTIGEN 1 325 - -
Vimu1g01929 329 MobiDBLite consensus disorder prediction 260 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01929 Vimu-Chr1 24887072 24890195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01929 - - gmx:100796784 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01929 1 24887072 24890195 Vimu1g01929 1 24887072 24890195 ECH
Vimu1g01929 1 24887072 24890195 Vimu10g02483 10 36015060 36017321 PCT