Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02483 ATGGATCTGTCTCCACAAGTGGACGATTGCATTAAACAAACCATCGACCATTCCTTAGGGATTCCCATACCGGCAGAAACCCTAGAGGCCAAGCTTCGAGCTTCTCAAGACTCGCAGTGGCGTCTCCGCGAATGTCTGCGTTCAGTTAAATCCCAATTGGAGCGTAAAGACCGCCTCATCAACTGCTTCAAGGTTTCGCGGCTCTTCTTGGTTTTCTTTTCAATCTTTCTCTTGTCATTTTCTTTTTTTGAAAATTTGATGACGGGGATTCTGGGGCTTTTTGAGCAGTCTGAAGCGTCTATGAACGCGCAAGCTCTGAAGAAATTCGTGGAGGAGAATCATAGACTGGCACTGGAGTGTGATAAGTTGGTGGCCCAACGCTGTCGGTTGGAGAATGAGTGCGCGCTGTATGAGAAGGACAGGGAAGCGTTGATGGAATTTGGGAACGATGCTGATGAACGGGCACGGGAGGCGCAATCCCAGGTTCTCGATTTGCAACAAGATTTGCTCTTTATGCACAATGAAGTGCAGAAATATAAGCAGAATCATGAATTGGTTCAGTCTTCCGCGTGTCCGCCTGAAGAAACTAATTTACTCGGTTCTGTTTTGGCATCACTTATTACTAGAGATGACGATTCTACATATGCATATTTACAAGCAAACAGTGAGAATGAGTCCTGTAAGAAGTTGCTGAATGTGTGGAAGGGCTTGAGTCCGTCTGCTCTGAGTGTTTTGTCACTTGTTGCTAAAGTGAAGTCACTGGAGAAGGACAAGGAGCATCTGAGAACTAACCTTCAGAAAGCGGAGGAGGAGGTCAAAGTACTGTTTAATGAAAATAATGTATTGGAAAAGGAGAACAAAAGGTTACTGAGGATATACAAGGAAAAGAACCATCCTGATTCTGCTGATAAACATACCAACAGTCCATCAGCCAAGTCTAACAAGAGAAAGTCTGTCAGTCCCAGGACAAATAGCCCAATGAGGAAGTTTGATTTGGACGATCAAGATTTAGCTAGACAACCTTTGTCTCCCTTACGACATAACTCCCCGGACTGTAGGATGCGTAAGAAGTAA 1074 0.4469 MDLSPQVDDCIKQTIDHSLGIPIPAETLEAKLRASQDSQWRLRECLRSVKSQLERKDRLINCFKVSRLFLVFFSIFLLSFSFFENLMTGILGLFEQSEASMNAQALKKFVEENHRLALECDKLVAQRCRLENECALYEKDREALMEFGNDADERAREAQSQVLDLQQDLLFMHNEVQKYKQNHELVQSSACPPEETNLLGSVLASLITRDDDSTYAYLQANSENESCKKLLNVWKGLSPSALSVLSLVAKVKSLEKDKEHLRTNLQKAEEEVKVLFNENNVLEKENKRLLRIYKEKNHPDSADKHTNSPSAKSNKRKSVSPRTNSPMRKFDLDDQDLARQPLSPLRHNSPDCRMRKK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02483 357 Coils Coil 244 285 - -
Vimu10g02483 357 MobiDBLite consensus disorder prediction 306 325 - -
Vimu10g02483 357 PANTHER EARLY ENDOSOME ANTIGEN 1 357 - -
Vimu10g02483 357 MobiDBLite consensus disorder prediction 295 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02483 Vimu-Chr10 36015060 36017321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02483 - - pvu:PHAVU_009G033700g 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02483 10 36015060 36017321 Vimu10g02483 10 36015060 36017321 ECH
Vimu1g01929 1 24887072 24890195 Vimu10g02483 10 36015060 36017321 PCT