Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01860 ATGAATGGAAGTGGAAGGTCTTCAAAGGAAGACTTTAGCACTCTACTTGCCAAACTACAATCTTCAAAAATGGCATCAGTGCCAACCACTTTTGATGCCACATTATCCAATGGTATTCCCAAAAATTCAAGTTTCAATTCGGGGGTTATGAGTCCTGATACTTGTGTGGAGGCTGAAGTACAGGAGGCTTATGAACGGGAAGATGAGGATGAAGATTCACCGGAGATCAAGAGGGAAATCTCTGATTTTCATATCCAGGATCATGAAGCTGTTGCAGACAAAGGATATGGTGCAACTGATAAAGAAATAGAGTATCCTATTTTGTACGAAAATCAAGTCAACGAAGAATCGGATGACAGAACCGACAAATACAGCCAAAAGAGTGTTGAAACAACCGAAAGTGGACTCGTCAGTGATCCTGGGATTCGGAAAGCTAATTTGTGGACTTCTGGAAAGTTCAAGAGACACTTCTCTAACCTTGAAAAGTTTGATGAGCATGGTACGAAAACTCGTTATTTGTCAGCTTTAAAGTCAAAGCCTTTTGATAATTTTAAGGAATTATCAGCAATGGTTAATCTTGAAAGCCCATGGTCAGTGAAGAGTGACTACAGTGCTGATAGAGTAGTGCTGAAAAGGCATTCTTCAAGTCAGTTACTTTCTTGTGGAAAGAAAAAATTGTGGTGGAAAATGATCCTGCGGAGCCACAGGAACATACACAGAACTTTCTCAGGCAATTCAACGCTGGTTCCTGCCAGTGCTGCATTAAATAGTGGGTACTCTTCAGACACCCTTGAACCAAAACAAGGAAAGACAATGAGGCCTGTCAAATCCTCTGGTTCAATTACTGCAGAATCCTTTAACAAAAGAAGAACTGATAAAAGTACAGATAATAAAAAGGAGAGAAGGTTTCAAAGTGACCAATGGCTTGCTCTCTCCAAAGAATCATCCTCTTTTGCCAGAGTGGATGCATGGGTGAAAGGTCTTGAAATTCAGCAACTACTTCCTGAGGATGATTTTGATGTTGACAATGGCAGAAGCATAACCTTCCCACCTTCCCCTGATACTGGTGGAACAATGATGAGAGCCACATCTCAGTTGACTTATTCAGATGCCAATTTTTCAAAAGAGACTTTAACTGCCATTAGTGTAGTCCAGTCTCTAAATCCAGCTTCATCTATTGCTCACATATGTGGTATTGGTGTAAAAGCCATCCCTGCTGTTTCACACTTATCCAATCTCCGCAACATCAACCTGTCAAACAATTTCATAGGTACAACTTGGAACTAG 1287 0.4071 MNGSGRSSKEDFSTLLAKLQSSKMASVPTTFDATLSNGIPKNSSFNSGVMSPDTCVEAEVQEAYEREDEDEDSPEIKREISDFHIQDHEAVADKGYGATDKEIEYPILYENQVNEESDDRTDKYSQKSVETTESGLVSDPGIRKANLWTSGKFKRHFSNLEKFDEHGTKTRYLSALKSKPFDNFKELSAMVNLESPWSVKSDYSADRVVLKRHSSSQLLSCGKKKLWWKMILRSHRNIHRTFSGNSTLVPASAALNSGYSSDTLEPKQGKTMRPVKSSGSITAESFNKRRTDKSTDNKKERRFQSDQWLALSKESSSFARVDAWVKGLEIQQLLPEDDFDVDNGRSITFPPSPDTGGTMMRATSQLTYSDANFSKETLTAISVVQSLNPASSIAHICGIGVKAIPAVSHLSNLRNINLSNNFIGTTWN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01860 428 PANTHER NISCHARIN RELATED 191 423 - -
Vimu1g01860 428 MobiDBLite consensus disorder prediction 113 127 - -
Vimu1g01860 428 MobiDBLite consensus disorder prediction 259 285 - -
Vimu1g01860 428 MobiDBLite consensus disorder prediction 113 136 - -
Vimu1g01860 428 MobiDBLite consensus disorder prediction 259 300 - -
Vimu1g01860 428 MobiDBLite consensus disorder prediction 286 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01860 Vimu-Chr1 22950956 22952807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01860 - - gmx:100801034 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01860 1 22950956 22952807 Vimu1g01860 1 22950956 22952807 ECH
Vimu1g01860 1 22950956 22952807 Vimu10g02509 10 36319929 36323059 PCT