Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01808 ATGTTGCTTTGGCTCTATGTGACATGCTTCGTAGGTGCGGAGGTTACTCTGGAATGCAAGGACAGAATCAGAGGAAACATTGTGTACAGCAAGACCGTTAAGACCGATTCCTCAGGATCATATACGATCTTCGTAGACGCGAATCAAGCAAACCAAAATTGTGACGCGAGTCTTGTAACCAGTCCTCTACCTGACTGCAGAGAACCCACTCCAGGCCGTGACCACTCACGTGTTATTCTCAATCGCTACAATGGTATTGCTACCAAGGATAGGTTTGTCAACAACTTGGGTTTCATGAAGCAAAAGGTTGTATCTGCTTGTGCAAAGATTTTCAGGCGATACCGAGATAATGATGATGGGGAGGAGGATTCACTCAATTCTTTGTTTTAG 390 0.4487 MLLWLYVTCFVGAEVTLECKDRIRGNIVYSKTVKTDSSGSYTIFVDANQANQNCDASLVTSPLPDCREPTPGRDHSRVILNRYNGIATKDRFVNNLGFMKQKVVSACAKIFRRYRDNDDGEEDSLNSLF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01808 129 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 11 115 IPR006041 -
Vimu1g01808 129 Pfam Pollen protein Ole e 1 like 10 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01808 Vimu-Chr1 20940953 20941342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01808 - - gmx:100796594 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01808 1 20940953 20941342 Vimu1g01808 1 20940953 20941342 ECH
Vimu1g01808 1 20940953 20941342 Vimu10g02554 10 36844722 36845042 PCT