Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02554 ATGTTGCAATGCAAGAGCAGGACGACGAACGAGGTTGTGTACACAAAGAAGGGGAAGACTGATTCGAGCGGAGCATACACAATATACGTGGATGAAGATCATGCAGATGAGGTCTGCAATGCTAAGCTTGTGAGCAGTAATCACCCTGAATGCAGGGAAGTGACCCCTGGCCGTGACGAAGCCCTTGTTATTCTCACCCGCTACAATGGCATTGCCTCCGACGACAGGTACGCCAATGCCATGGGATTCATGGCTCAGGATGTTGCTGATGGCTGTGCTGAGGTCCTCAGGCAATACCAGGAGTTCGACAATGAGAACTAA 321 0.5078 MLQCKSRTTNEVVYTKKGKTDSSGAYTIYVDEDHADEVCNAKLVSSNHPECREVTPGRDEALVILTRYNGIASDDRYANAMGFMAQDVADGCAEVLRQYQEFDNEN 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02554 106 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 2 101 IPR006041 -
Vimu10g02554 106 Pfam Pollen protein Ole e 1 like 2 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02554 Vimu-Chr10 36844722 36845042 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02554 - - gmx:100305566 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02554 10 36844722 36845042 Vimu10g02554 10 36844722 36845042 ECH
Vimu1g01808 1 20940953 20941342 Vimu10g02554 10 36844722 36845042 PCT