Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu1g01798 | ATGAAGAGAACCACCAGCATGTCCCAAATAAAGTTGGATCTGAACGCCGCCGCCTCCGATGTAACCGACCAACGGAGATCAGGTGCTGGTGGCGGCGCTAGTTGCGGCGCTTTAACACCAAAAATTCTTAGAAGACATTCTTCGGATTTCGTAGACACACCACACTTCCTGCGCGCGTGTGCCCTCTGCAAAGGCCGTCTCGCACCCGGTCGAGACATCTACATGTACAGGGGTGATAATGCTTTCTGCAGCCTGGAGTGTCGTCAGCATCAGATGAACCAGGACGAGAGGAAAGAGAAGTTTGTGACGGCGTCGAAGAAGCAAGTCGTGGCTCCTCCACCGTCTGGTTCTCAAATCGCCGCCACCACCAAGGGCGAAACCACCGTGGTGGCGTTGTAG | 399 | 0.5489 | MKRTTSMSQIKLDLNAAASDVTDQRRSGAGGGASCGALTPKILRRHSSDFVDTPHFLRACALCKGRLAPGRDIYMYRGDNAFCSLECRQHQMNQDERKEKFVTASKKQVVAPPPSGSQIAATTKGETTVVAL | 132 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu1g01798 | 132 | PANTHER | FCS-LIKE ZINC FINGER 5 | 1 | 117 | - | - | |
| Vimu1g01798 | 132 | ProSiteProfiles | Zinc finger FLZ-type profile. | 55 | 99 | IPR007650 | - | |
| Vimu1g01798 | 132 | Pfam | zinc-finger of the FCS-type, C2-C2 | 48 | 98 | IPR007650 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu1g01798 | Vimu-Chr1 | 20504413 | 20504937 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu1g01798 | - | - | gmx:100527853 | 181.415 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu1g01798 | 1 | 20504413 | 20504937 | Vimu1g01798 | 1 | 20504413 | 20504937 | ECH | |
| Vimu1g01798 | 1 | 20504413 | 20504937 | Vimu10g02555 | 10 | 36858288 | 36858830 | PCT |