Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01773 ATGGAAAAGAGAGAGTTAGAGGAGACAGATCAGCCAAGTCCTCGGGCTGTTGGAAAGATAGAAGGGGATTCGAGTGAAGAAGATAGGAAAAAATACTCAGTGCGGCCAGAAACACAAAATGTAGACTGTGATAGCTCTGAGTTTGGGAATGATCGGCGTATTGGTCATGATGCTCTCAAGTTTGATGATGAGCAGCATAATATGCCAGAAAGGGTGGAAGAGGTGATAGATGTAGAGTTGAATACTCATGAGGAAAGAAAAGACAATGTAGCAGGAGAATCTCAGTTGGCACAGAGGTTGGGCGATAGTTGCGATTTGCTGTGTGGATCTCATCAAGAAAACTTGGAGACCGGTACCGTTCCAGATGACTTGTTTCACAAGGATCATGATAGTGATTCCATGGAATTTGGAATTGAAGTAAGCATTGTTGGACAAGAGTGTTCAGGTGTTAATGGAGGCAGTGGAGATTTTGAGCCTGAAAGACAAGAAGTAAGTCTAGATAATTTTGTGAAGCAAGGTTTGTTCATGGAGAAGGATGATAGCAGAAGCGTGGAATCTGCACAAATGAATAAAAAAACAGAGAGCACTTCAGAGGGCAGTAATTTGGAGCCTGATGTTGGTGGAGCTGTGATTCCTGGAACTGAAGCTGGCTGCAGCACATCTATGGATACTTTGAACACCAATCTGGAGGTTCCACGTGGAGTTGAGAAGACAAAATCTCTTAGAGACTTTGTTAAGGAGAAAAGTATAATAGCAGTCTCCACGGTGCTTCGCCGCCTTTCTGTAAGAAGAGACGAATGTACTGTGGCTAAATCTGATAACATGGGTAAGGACCCTTCAGATTTATCAAGAGATAGTGACACGAAAGAGGTTCCTGAGAAGACAGGGGAGAAAACAACTTGGAATCCCTTAAATTATATTAAAACGTCATCTGTTGATGCTGAAAATAGAATTGTCTCAAGGGAGGAACCTATAAATGAAGGTCCACCACTACCCATACCCATGAAAGGAAGGATTATAGTGTACACGAGACTAGGGTGCCCGGAATGTAAAGAGGTGAGGAAATTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAACATTGATGTCTTTCCTAGTAGAAAGATGGAGCTGGAGAAGAATTCAGGATCTACATCTATTCCCAAGGTTTTTTTCAATGGAATACTTATTGGAGGCTTGAGTACACTAAAGTCCTTAAATGAGTCTGGCAAACTTAATGAGAAGATTGACTACCTTATTAATGAAGTACCATCATTTGAATGCCCAGTTCCTCCACTTTCTGGAGAGGATGATGTGTCCAGTAGAGGGGCGCTTGATGAAATGGCTCTAATTGTCCGCAAAATGAAAGAATGCATTGTTGTGAAGGACCGATTTTGCAAAATGCGGAGGTTTGCTAACTGCTTCATTGCTTCTGATGCTGTGAACTTCTTATCAGAAGATCAATATTTGGAAAGGAAGGAGGTAAGCTTGATCTCAAGTTTCGATCACATTCTAGTGTGTTTTAACAACATTGTATATTCTCCCAAGTGTAATCGTTTGATGCATCTATAA 1575 0.4108 MEKRELEETDQPSPRAVGKIEGDSSEEDRKKYSVRPETQNVDCDSSEFGNDRRIGHDALKFDDEQHNMPERVEEVIDVELNTHEERKDNVAGESQLAQRLGDSCDLLCGSHQENLETGTVPDDLFHKDHDSDSMEFGIEVSIVGQECSGVNGGSGDFEPERQEVSLDNFVKQGLFMEKDDSRSVESAQMNKKTESTSEGSNLEPDVGGAVIPGTEAGCSTSMDTLNTNLEVPRGVEKTKSLRDFVKEKSIIAVSTVLRRLSVRRDECTVAKSDNMGKDPSDLSRDSDTKEVPEKTGEKTTWNPLNYIKTSSVDAENRIVSREEPINEGPPLPIPMKGRIIVYTRLGCPECKEVRKFLYMKRLRYVEINIDVFPSRKMELEKNSGSTSIPKVFFNGILIGGLSTLKSLNESGKLNEKIDYLINEVPSFECPVPPLSGEDDVSSRGALDEMALIVRKMKECIVVKDRFCKMRRFANCFIASDAVNFLSEDQYLERKEVSLISSFDHILVCFNNIVYSPKCNRLMHL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01773 524 MobiDBLite consensus disorder prediction 1 37 - -
Vimu1g01773 524 MobiDBLite consensus disorder prediction 271 300 - -
Vimu1g01773 524 Pfam Glutaredoxin 339 396 IPR002109 -
Vimu1g01773 524 MobiDBLite consensus disorder prediction 1 49 - -
Vimu1g01773 524 PRINTS Glutaredoxin signature 381 394 IPR014025 -
Vimu1g01773 524 PRINTS Glutaredoxin signature 339 357 IPR014025 -
Vimu1g01773 524 PRINTS Glutaredoxin signature 395 408 IPR014025 -
Vimu1g01773 524 Gene3D Glutaredoxin 335 419 - -
Vimu1g01773 524 MobiDBLite consensus disorder prediction 271 296 - -
Vimu1g01773 524 Gene3D - 445 510 IPR036388 -
Vimu1g01773 524 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 60 495 - -
Vimu1g01773 524 SUPERFAMILY Thioredoxin-like 337 418 IPR036249 -
Vimu1g01773 524 MobiDBLite consensus disorder prediction 188 202 - -
Vimu1g01773 524 ProSiteProfiles Glutaredoxin domain profile. 327 424 - -
Vimu1g01773 524 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01773 Vimu-Chr1 19226207 19227781 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01773 - - ccaj:109814814 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01773 1 19226207 19227781 Vimu1g01773 1 19226207 19227781 ECH
Vimu1g01773 1 19226207 19227781 Vimu10g02237 10 32753436 32756680 PCT