Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01577 ATGGTTTCCAATGGAGATGAAGAATCAAGCAACCAAGTCCAACAATCTGAAACCTCTAAATGTTCACGATTGCCCTTTTTAAGGTACAACTCGCCACTAGTTCAAGTGATCCTCATTGGTGTTGTCTGCTTTTGCTGCCCCGGCATGTTCAACGCCCTCTCAGGAATGGGTGGTGGAGGCCAACTGAACCACACTGCCTCCAACAACTCCCTCACTGCCCTCTACACCACTTTTTCCTTGTTTGGCATCCTTGGCGGCGCCATCTACAACATCCTAGGACCTCACCTTACCCTTCTCGCAGGATGTTCCACCTACGTCCTCTACACATCCTCCTTACTCTACTACAACCATCACCACCACCAAGCCTTTGCCATTCTTTCCGGTGCTCTCCTTGGTGTAGGAGCAGGTCTCTTGTGGGCAGCACAAGGCACTTACATATCTATTTTCTGGAGCATCTTCAACATGGGTGGAGTAATTGGTGGTTTGATTCCTTTCATCTTGAACTACCATCGTAGTGAGGCTGCTTCTGTGAATGATGGAACCTACATAGGTTTCATGTGCTTTATGTCAGTGGGGACCCTCTTGTCGTTGGCCATCTTGCCTGCATGCAAGGTGGTTCGTGATGATGGGAGTAGGTGCACCAGAATGGTGTACTCCAATGTGTCCACCGAGTGTGTGGAGGTTCGCAAGTTGTTTTCCAATTGGAAGGTGCTTCTTATGGTTCCCGCAGCTTGGTCCAGCAACTTCTTTTACCCTTATCAGTTCAATGATGTTAATGGAGCAGTGTTTAATTTGAGGACTAGAGGGTTCAACAGTGTGTTCTATTGGGGGGCTCAGATGCTGGGTTCTGTTGGGATTGGTTATCTGCTGGATTTCAGCTTTGAGAGGAGAAGGTTGAGGGGGTTGCTGGGAGTTGTGGTGGTTGGTGTTCTTGGGACTGCAATTTGGGGTGGTGCACTTGCTAATCAGCTTAGGTACAACTCCAATGTTTTGCCAGAAAAGTTAGATTTTAAGCACTCAGGATTTGCTGGACCTTTTGTCTTGTACTTTAGTTTTGGATTGCTAGATGCCATGTTCCAGAGTTTGGTCTATTGGGTTATTGGAGCCCTGGCTGATGATTCTGAGATCCTCAGCAGGTACAGTGGTTTGTTTAAAGGAATACAGAGTGCAGGGATTGCTGTTGCATGGCAAGTAGATGAACACAATGTGTGTTTGATGTCCCAGTTGGTAGTGAATTGGGTGCTCACAACAATAAGTTATCCATTACTCTTTGTTTTGGTCATGTTTGCTGTGAAAGATGAATAG 1305 0.4667 MVSNGDEESSNQVQQSETSKCSRLPFLRYNSPLVQVILIGVVCFCCPGMFNALSGMGGGGQLNHTASNNSLTALYTTFSLFGILGGAIYNILGPHLTLLAGCSTYVLYTSSLLYYNHHHHQAFAILSGALLGVGAGLLWAAQGTYISIFWSIFNMGGVIGGLIPFILNYHRSEAASVNDGTYIGFMCFMSVGTLLSLAILPACKVVRDDGSRCTRMVYSNVSTECVEVRKLFSNWKVLLMVPAAWSSNFFYPYQFNDVNGAVFNLRTRGFNSVFYWGAQMLGSVGIGYLLDFSFERRRLRGLLGVVVVGVLGTAIWGGALANQLRYNSNVLPEKLDFKHSGFAGPFVLYFSFGLLDAMFQSLVYWVIGALADDSEILSRYSGLFKGIQSAGIAVAWQVDEHNVCLMSQLVVNWVLTTISYPLLFVLVMFAVKDE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01577 434 PANTHER ET TRANSLATION PRODUCT-RELATED 33 433 - -
Vimu1g01577 434 Pfam Ion channel regulatory protein UNC-93 61 242 IPR010291 -
Vimu1g01577 434 Gene3D MFS general substrate transporter like domains 35 431 IPR036259 -
Vimu1g01577 434 SUPERFAMILY MFS general substrate transporter 40 407 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01577 Vimu-Chr1 14893381 14895846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01577 - - gmx:100780390 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01577 1 14893381 14895846 Vimu10g01505 10 16584198 16586643 PCT