Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01505 ATGAGTAACCTTGAAAATGGAGATTCAAATACCCAGATCCCTCAAGACAGAAAAAATTTTAACCTTTTCAGGTACAATTCACCGATCATTCAGATCATTCTTATTGGGTTGGTATGTTTTTGCTGTCCGGGCATGTTCAATGCCCTCTCCGGCATGGGTGGCGGTGGCCAAGTAAACTCCACCGCTTCCAATAACGCCCTCACCGCCCTCTACACCACCTTCGCAGTCTTCGGTATTCTCGGCGGCGGCATCTACAACATCCTCGGACCCCACCTCACCCTCTTCGCAGGTTGCTCCACCTACGTTCTCTACGCCGGCTCCTTCCTGTACTACAACCACTACCAGCACCAGTTCTTCGCCATCACCGCGGGCGCCATTCTGGGAATCGGTGCCGGCCTCCTCTGGGCGGCGCAGGGCGCCATCATGACCTCCTACCCGCCAGAGAATCGCAAAGGCACTTACATTTCCATCTTCTGGAGCATTTTCAACATGGGGGGTGTCATCGGTGGTTTAATTCCATTCATTTTGAATTACAACCGTGGCGACGCTCCTGCCACCGTCAACGACGGAACCTACATAGGGTTCATGGCTTTTATGTCCGCTGGGGCTGTTTTGTCGTTGACCATTTTGCCAGCGAGCAAGGTTGTTCGAGACGATGGCACCAGGTGCACTCACATGGTGTACTCCAATGTGACAACTGAATCCTACGAAATTCTCAAGCTTTTCTACAATTGGAAGATGCTTCTGATTGTTCCCGCTGCTTGGTCGAGCAACTTCTTCTACACCTACCAGTTCAACCATGTTAATAAGCCACAGTTCAATCTGAGGACCAGAGGGTTCAACAATGTGTTCTATTGGGGGGCGCAGATGGTGGGTTCGGTTGCCATTGGTTATGTGATGGATTTCAGTTTCAAGAGTCGCAAGAAAAGAGGGGTTGTGGGAATTTGTGTGGTTGCTCTTCTTGCGTCTGGTATATGGGGTGGTGCCCTTGCGAATCAGATTAAGCGTGACCTCGGTGTGATCATGGATTTTAAGGACTCGGGTTCTAGCTATGCTGGACCCTTTGTCTTGTATTTCAGTTTCGGCTTGCTTGATGCCATGTTCCAAAGCATGGTCTATTGGGTTATTGGGGCCCTCGCCAATGATTCTGAGATTCTTAGCAGGTATGCTGGGTTCTATAAAGGCGTACAAAGTGCAGGAGCTGCAGTGGCTTGGCAAATTGATAACCATAAGGTGTCAGGTATGGCTCAGTTGATTGTGAATTGGGTGTTGACTAGTGTTAGCTATCCCTTGTTGTTGGTTCTGGTTGTGTTGGCTGTGAAAGAGGACAACAAGGGAGAAGAGGAACAAGCAAAACAAGTTGCACCTTCATCGGTTGAAAATGGCTCTGTCCGTTGA 1398 0.4943 MSNLENGDSNTQIPQDRKNFNLFRYNSPIIQIILIGLVCFCCPGMFNALSGMGGGGQVNSTASNNALTALYTTFAVFGILGGGIYNILGPHLTLFAGCSTYVLYAGSFLYYNHYQHQFFAITAGAILGIGAGLLWAAQGAIMTSYPPENRKGTYISIFWSIFNMGGVIGGLIPFILNYNRGDAPATVNDGTYIGFMAFMSAGAVLSLTILPASKVVRDDGTRCTHMVYSNVTTESYEILKLFYNWKMLLIVPAAWSSNFFYTYQFNHVNKPQFNLRTRGFNNVFYWGAQMVGSVAIGYVMDFSFKSRKKRGVVGICVVALLASGIWGGALANQIKRDLGVIMDFKDSGSSYAGPFVLYFSFGLLDAMFQSMVYWVIGALANDSEILSRYAGFYKGVQSAGAAVAWQIDNHKVSGMAQLIVNWVLTSVSYPLLLVLVVLAVKEDNKGEEEQAKQVAPSSVENGSVR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01505 465 Gene3D MFS general substrate transporter like domains 256 456 IPR036259 -
Vimu10g01505 465 PANTHER ET TRANSLATION PRODUCT-RELATED 29 447 - -
Vimu10g01505 465 Gene3D MFS general substrate transporter like domains 26 221 IPR036259 -
Vimu10g01505 465 Pfam Ion channel regulatory protein UNC-93 56 255 IPR010291 -
Vimu10g01505 465 CDD MFS_unc93-like 31 430 - -
Vimu10g01505 465 SUPERFAMILY MFS general substrate transporter 27 442 IPR036259 -
Vimu10g01505 465 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01505 Vimu-Chr10 16584198 16586643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01505 - - gmx:100796714 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01505 10 16584198 16586643 Vimu10g01505 10 16584198 16586643 ECH
Vimu1g01577 1 14893381 14895846 Vimu10g01505 10 16584198 16586643 PCT