Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01563 ATGCATCACCAGGGGTTCTTCTTCTGCTTCGACGTTGGGAGGCATCCTTTAAGTTTCAATGGCAGCCTCCTTCAACTAATAATGTTGGGATCTCGTCCAGCCCCACCAGCGGAAAATGCTGCCGACAACTCCCAATCGCGTGACTTTCGTTTTCACTCTCTCAACCGTGGCTCAAAAACCACCTCCCCATATCGATCCTCCTATTCCTTTATTTTCTGTTTTGATTGGGTTGGTTTCCCACTGGATGCATTGATGATAGGGGAATGGTTCTTTTTCTCTCGGAGCTTTTGTTTGTCTGGCACTTCACCTGGTTTCCTCTTCCCGTGTCTGACTTCTCCCTCTCCTTCTCAATCCCCTTCCGTTCTCCCTGTTGGCCCTTTCCAATGTTCTTGCAGGAAGGGGTTTTCGGCCATTAACCTCACATCACCTCTTTCCTCGATCGTTGTTCTTTCAATTTTTGATGATTTGATGAACATGGAGTCATCCACTTGCCCCTTCTGTGATTTATCTGTTCCTTCCTCTGAACTCCAATCGCACGCCAACGCCCATTTCGACGACAATGACGCCGATTATAGCTCCCCTTCGGTTAGTGGCTTGCATTTTGATGGTGGAGTAAGGGGTAGGGGTAATGTGGTATTGAAAATGGATGAAAAGATCTCTTGCTTAGTTGATGTGCAAAGAAGGGGAGAGTTTTACAAGGTTGAAAGAGGTTTGATGGCCTTGTTGAGAGACTGTTTGGAGTCTGAGGCTGAAAATTCAAGAAGCATTTTGACATGTTATGTTGATCATTTCCAGAGCCTTGAGTTTAAGGATGTTGGATGGGGTTGTGGTTGGCGTAACATTCAAATGCTTAGCTCTCACTTAATGACACAAAGGCCAGAAGCAAGAGAAGCTATGTTTGGCCGTTCAGGGTTTGTTCCTGATATCCCATCACTCCAGAGGTGGCTTGAGATTGCTTGGGAAAGGGGTTTTGATGCACCTGGCGCTGAACAGTTTAACCATGCTGTCTATGGCTCAAAAAAATGGATTGGAGCTACTGAATGTGCTGCCCTTTTGCGTTCTTTTGGTCTCCGGGTGAGGGTAGTGGATTTTGGTCCTAAGGAATCTGAGGAACTCTATCTATCTGTCCTTGGTTCAAGTGTTGGGGAAATGGATCTTGTGAAAAGTAACAATAAAAGGAAGAGGAAAACATCAAATACTTATGGACCAATGGATAGATATGTGTCTCGCGGTGTTGCTCAATCAAGTTGCAACCAAGATGCAAAGTCATGTCCTTCCCTTGTACGTGTTGGTGACGCTGTGCATAAAGAAAGTAGTGGTAATAGAGTGCTATACGGCAAAGAGAAACTAAATGAGGGTCACCAAGTTCTTATGAACTTTGTGTGGAATTACTTCTCCCATAAAAACACCGTTCAATTTGATCACAGGCATGTTCTTATCAGTGAGAAAACGCCACTGTACTTTCAGCATGATGGACATTCAAGAACAATAGTTGGAATTCAAGTCAAGCATCAGCGGTCTGGAATTGCACAATACAATCTCCTGGTTCTGGATCCCAGTCATAGAACTGGTGCTCTAGAAAGATCTCTTATAGAGAAAGTTGGATGGCAGAAACTCCTAAAAAGAGGAGTGCACACACTAAAGAAGCCACAATACCAGTTGTGTTATGTTGATCCTGGAATTGCCAGTGAGGAGGAGATGGAGAAACTCAAGACAATTGATAGTGTCTTCCTTGAATTTTAA 1743 0.4423 MHHQGFFFCFDVGRHPLSFNGSLLQLIMLGSRPAPPAENAADNSQSRDFRFHSLNRGSKTTSPYRSSYSFIFCFDWVGFPLDALMIGEWFFFSRSFCLSGTSPGFLFPCLTSPSPSQSPSVLPVGPFQCSCRKGFSAINLTSPLSSIVVLSIFDDLMNMESSTCPFCDLSVPSSELQSHANAHFDDNDADYSSPSVSGLHFDGGVRGRGNVVLKMDEKISCLVDVQRRGEFYKVERGLMALLRDCLESEAENSRSILTCYVDHFQSLEFKDVGWGCGWRNIQMLSSHLMTQRPEAREAMFGRSGFVPDIPSLQRWLEIAWERGFDAPGAEQFNHAVYGSKKWIGATECAALLRSFGLRVRVVDFGPKESEELYLSVLGSSVGEMDLVKSNNKRKRKTSNTYGPMDRYVSRGVAQSSCNQDAKSCPSLVRVGDAVHKESSGNRVLYGKEKLNEGHQVLMNFVWNYFSHKNTVQFDHRHVLISEKTPLYFQHDGHSRTIVGIQVKHQRSGIAQYNLLVLDPSHRTGALERSLIEKVGWQKLLKRGVHTLKKPQYQLCYVDPGIASEEEMEKLKTIDSVFLEF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01563 580 PANTHER ZINC FINGER PROTEIN 260 566 - -
Vimu1g01563 580 Gene3D - 242 396 - -
Vimu1g01563 580 Pfam Peptidase family C78 254 555 IPR012462 -
Vimu1g01563 580 Gene3D - 445 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01563 Vimu-Chr1 14629208 14632719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01563 K24134 - gmx:100789113 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01563 1 14629208 14632719 Vimu10g01515 10 16712928 16718713 PCT