Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01515 ATGGATTCGGATCAATTCACCACTTGCCCCTTTTGCGATTCATGTCTACCCTTATCTCAACTCACTAGAGAGAGCAAGCAACCACGGTTACTGTCTGGAGCAAAGTATTCGGGTGGTGGTGAGACTAGTAGCGAGAATGGGGAGTGCAAAATGAATGACAGAATCTCTTGCTTGATTGTTTCTCAGACAAGGTGTGAATTTCAGAAAGTTGAAGCGGGTTTGATGACATTGTTAAAAAATTGTTTAGAGTCTGAAATTGGAAATTCAATTAGCATTTTGTCGGGTTATGTTGATCATTTCCAGTGCCTTGAATCTGAGGATGCCGGATGGCGTTGTGGGTGGCGTAACATTCAAATGCTTAGTTCTCACTTGCTAGTTCAAAGACCTGAAGCAAGGAAAGCTTTGTTTGGTGGTTCGGGATTTGTTCCTGATATCTTGTCGCTGCAAAGGGCAAGAGTAGTGGATTTTGGTCCTAAGGAATCCCAATCCATTCCAGGTTCTAGCGCTGACAATGCCAGGAATGAAACAAGTATTCATTTGGTAAAACAGAAAGATAAAGAGGGCAGTGGTTATCAAGTTCTCATGGATTTTGTGTGGAATTACTTTTTGGACGAAAACTCAATCCAATTTGGCCAAAAACATGTTCTGATCAGTGAGAAAACGCCTTTATACTTCCAACATGACGGTCACTCAAGAACAATAGTTGGAATTCAAGTCAACTATCAACAAAAAAGACATCTGCAATATAATCTCCTAATTTTGGACCCAGCTCAGAGAACAGCCGCTCTTGAAAGATCCCTCAGGCAGAAAGTTCGGTGGGAAGAACTCAAAGAGGGGAATGCATACACTAAAGAAGCCACATTGTGTTATGTTGACCCTGGAATCGCTAGTGAGGGGGAGGTAGAAAAACTGAAAACAATTGATAGCATCTTCCTTGAATTTTAA 945 0.4148 MDSDQFTTCPFCDSCLPLSQLTRESKQPRLLSGAKYSGGGETSSENGECKMNDRISCLIVSQTRCEFQKVEAGLMTLLKNCLESEIGNSISILSGYVDHFQCLESEDAGWRCGWRNIQMLSSHLLVQRPEARKALFGGSGFVPDILSLQRARVVDFGPKESQSIPGSSADNARNETSIHLVKQKDKEGSGYQVLMDFVWNYFLDENSIQFGQKHVLISEKTPLYFQHDGHSRTIVGIQVNYQQKRHLQYNLLILDPAQRTAALERSLRQKVRWEELKEGNAYTKEATLCYVDPGIASEGEVEKLKTIDSIFLEF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01515 314 Gene3D - 171 295 - -
Vimu10g01515 314 Gene3D - 76 169 - -
Vimu10g01515 314 Pfam Peptidase family C78 90 151 IPR012462 -
Vimu10g01515 314 Pfam Peptidase family C78 183 285 IPR012462 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01515 Vimu-Chr10 16712928 16718713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01515 K24134 - gmx:100781936 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01515 10 16712928 16718713 Vimu10g01515 10 16712928 16718713 ECH
Vimu1g01563 1 14629208 14632719 Vimu10g01515 10 16712928 16718713 PCT