Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01025 ATGGGTCATGTTTCAATTGAATTTGGCGGAGGAATCCGAGTAACAGTTGATGATGGTAACATTGTAAGAAGAGTAGCTTGTCCCTGGTGGGTTGAATATTGGGTAGTTGACATGGCACTTAGGCCACTGAGCAAACCACTATTGCCTTTTGTATGGCTGTGCTTCATCTTGGCAAGTTCTATTGGTAAATGTCAGGTAGATCTGCTTGACAAAATGGGACATGTAAAGTTGCAAACGCAAACTGGTATCAATGCGATAGAAGAGGCATCTGGACAGTGTGATGCTGAGTATCCTGACAAGACTACTGTGGCATGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCTGTCATGAGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTCTGAAGGCATTAAGGAAGCAAATTTTTTCTTGGCAGAATCAGTGGCATGTAATAAGCCCTGCCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACCGGTGCACCAATTACTGGTGTCGCTCTATCATCTGTTTACAAGATCTTGACATTGGATGTAATTGATCAAAATACTGTTAATGTTGGGGATGCCATGCACTTGGTAGTTGATGCTGTTACAAGTTGCAGGTTTGAGGTGACTGATCCTGGATCGGAAGAAGTGGTATTAATGAAGATATTACAAGTTCTTCTAGCATGTGTGAAGAGCAAAGCATCTATGATGCTGAGTAACCAACATATTTGCACCATAGTAAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAAGTGAATTGTTGCAGCGGATAGCACGTTACACAATGCATGAACTTGTTCGGTGTATTTTTTCTCACCTTCAAGATATTGACAACGCAGAACTTGCTTTAAATAATGGCAGCACTGCTTTACAGAAAGAGATTGTTGGGCTAAATAATGATCATAATTCTCCAAATAGACAATTGGACAATGGGAACTTGACTTCTGCTAGTAGTGGTCAACCCTTATCCACAGGCATTGCTCCTAGTACTGTGAGTGATGTGGCAGCCACTGTATTAGATGAAGACACAGCAATTGCAAGCAGTGATCAAGAGGCTGACCTGAATGAGTTGCAGCTTATAAATGAACCATATGGGATTCCCTGCATGGTGGAAATATTTCACTTCTTGTGTTCTTTGCTGAACGTTGCTGAACATGTGGGAAATAGTCCTCGCTCTAACACTATAGCATTTGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCTTCCTTTCACCAGCACCCTAGATTGCTAAGCTTAATTCAGGATGAATTATTCCGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCTCTCGTACTTTCAATGGTATGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGTGCTTCATATCAGCAGCAGGAAGTTGTCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATGCTAACTTTGACTGTGACCTAACTTGTAGTAATGTCTTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCTTTTCCTGTGAACAGTCCATTGACTTCCATGCATATTCTTGCTTTGGAGGGTCTTATTGCTGTCATGCACGGAATGGCTGACAGGATAGGCAATGGATCTTTAAGTTCAGAACAATCTCCTGTGAATCTTGAAGAGTATACTCCGTTCTGGCAGGAAAAGTGTGAAAATTTTTGTGATCCAAAAAATTGGGTTCCTTTTGTATCCCGGAGAAAGTTCTTCAAGAAAAGATTGATGATTGGTGCTGATCATTTTAATCGTGATACTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTTTTACCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTCATTGGTGATTTTCTAGGAAATCATGATGAATTCTGCATTGAAGTTCTTCGTGAATTTGCTAAAACATTTGATTTCAAAGACATGATGTTAGACACTGCCCTACGCCTATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATACAGAGGGTGCTTGAAGCTTTCTCAGAACGATATTATGAACAGTCTCCACAGATCCTAGCCAATAAAGATGCTGCTCTGTTGTTATCATACTCAATTATAATGCTTAATACAGACCATCACAATTCACAGGTCAGAAACAAGATGACAGAAGAGGATTTTATCCGTAATAATAGGCGAATAAATGGTGGCAGTGATCTACCTCGAGAGTTTCTGTCTGAACTTTACCATTCAATTTGTAAGAATGAGATTCGAACAACTCCTGAGCAAGGTTCTGGTTTCCCTGAAATGACCCCAAGTCGGTGGATTTATCTCAAGCATAAGTCAAAAAAATCTGATCCATTCATTGTTTCTGATTCCAAAGCATACCTTGATTATGATATGTTTTCTATATTGTCTGGTCCAACAATTGCGGCCATTTCTGTAGTATTTGATAATGCTGAGAATGCGGAGGTATACCAAACATGTATGGATGGATTCATAGCTGTTGCAAAGATATCAGCTTACTATCATCTTGAAAATATACTGGATGATTTGGTTGTGTCACTTTGTAAGTTTGTTACTGTTTTTGATCCATTAGCTGTTGAGGAATCCATCCTAGCCTTTGGAGAAGACATGAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCAAATAGGTATGGTGATTTCATCCGCACAGGGTGGAGAAATATTCTTGATTGCATCTTAAAATTTCACAAGTTAGGGCTTCTTCCTACTCGTATTGCCAGTGATGCAGCAGAAGAGTCAGAGCTTTCTACAGAAACTGAGGATGGGGGGAAGCGTACTATTAATGCTTTATCTTTATCGCGTCTTCCATCTGTAAATACTACAAAGAGATCCTCTGGATTGATGAGCAGGTTTAGTCAACTCTTGTATCTAGGTGCCGAAGAGCCAAAATCAGTTCCTAGTGAAGAGCAACTTGCTGCTCAGCAATGCACCCTTCAAACAATTCAGAAGTGTCACATTGACAGCATATTCTCTGAGAGTAAATTTTTGCAAGCCGAATCTCTATTGCAGCTTGCAAAAGCAATCACTAGTGCAGGAGTGAGACCTAAGAAAGGAAACAGCACATCTGAGGACGAAGATACTTTGGTTTTCTGCCTGGAGTTACTGGTAGCAATCACTTTGAATAACAGGGATAGAATTGAACTTCTTTGGCAGGGTGTATATGAGCATATTTCCAACATTGTTCAGTCAACCGTGATGCCTTGTGCATTGGTAGAGAAGGCTGTTTTTGGCCTTTTACGAATTTGTCATCGCTTACTTCCCTATAAAGAGAACATTACTGATGAACTTCTGAGGTCTCTGCAACTTGTCCTTAAGCTTGATGCTCGTGTTGCTGATGCATACTATGAGCAGATAACACAGGAAGTTAGTCACCTCATGAAGGCAAATGCCTCTCATATTAGATCTCATTTAGGATGGCGGACAATTACATCACTGCTTTCCATCACTGCTAGACACCTGGAAGCAGCTGAGGCCGGTTTCGACGCATTGTTGTTCATTATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGCATAGATGCAGCGAAGCAGTTTGCTGAATCTCGTGTTGGACAGGTTGAACGGTCTGTAATGGCCCTTGATCTTATGTCAGGGTCTGTCAGTTGTTTAGAGAAGTGGACTAATGATGCTAAGCAAGCAACGAAAGAAGAGGAATTGGCAAAGGTGTTACAGGATATTGGGGACATGTGGTTGAGGCTCGTACAGGGACTAAAAAAACTGTGTCTGGACCAGAGAGAGGAGGTTAGAAACCATGCGTTGTTATCTTTACAAAAGTGCTTGACAGGATCAGTGGGGATTAATCTTCCACATAGCTTGTGGTTACAATGTTTCGATCAAGTGATCTTCTCTGTGCTCGATGACCTGATTGAAATTTCTCAAACACAGTCTCAAAAGGACTACCGGAACATAGAAGGAACACTTGTTCTTGCTCTGAAGCTCCTGTGTAAAGTTTTCCTCCAGTTAATCCAATATCTATCAGAATTGCCAGACTTCAGCACATTATGGTTGGCTGTACTAAGTCGGTTAGAAACTTATATGAAGGTGAAAATTAGAGGAAGGAGAAGCGAGAAGCTTCACGAACTTGTGCCTGAGCTTCTTAAGAACACTGTGCTTGTTATGAAAACGGGGCAAGTACTAGTGCGGAGCGATAGTGTAGATGGAAGTAGTTTGTGGGAACTGACATGGCTGCATATAAATAATATTTCTCCGTCAATGCAAGTTGAGGTGTTCCCGGAGTCAGATTCCAAGGATTTGCAGAAAAAACAGACTGAAAAGGTTGAAGGTTTGGTATCTGATGAAAACAATTCTGTGTCTTCAAATGAAACAGCAGGTCAAGATGGTCCTGGTTGTCCGGGTTCTCTTCAAGTGATTGATTATGCAGAACTTCTCAGATCTCATTCACATCTTCACTGGGACTCTTGA 4701 0.408 MGHVSIEFGGGIRVTVDDGNIVRRVACPWWVEYWVVDMALRPLSKPLLPFVWLCFILASSIGKCQVDLLDKMGHVKLQTQTGINAIEEASGQCDAEYPDKTTVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKALRKQIFSWQNQWHVISPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASMMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRCIFSHLQDIDNAELALNNGSTALQKEIVGLNNDHNSPNRQLDNGNLTSASSGQPLSTGIAPSTVSDVAATVLDEDTAIASSDQEADLNELQLINEPYGIPCMVEIFHFLCSLLNVAEHVGNSPRSNTIAFDEDVPLFALTLINSAIELGGPSFHQHPRLLSLIQDELFRNLMQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYANFDCDLTCSNVFEDIANLLSKSAFPVNSPLTSMHILALEGLIAVMHGMADRIGNGSLSSEQSPVNLEEYTPFWQEKCENFCDPKNWVPFVSRRKFFKKRLMIGADHFNRDTKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLIGDFLGNHDEFCIEVLREFAKTFDFKDMMLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPQILANKDAALLLSYSIIMLNTDHHNSQVRNKMTEEDFIRNNRRINGGSDLPREFLSELYHSICKNEIRTTPEQGSGFPEMTPSRWIYLKHKSKKSDPFIVSDSKAYLDYDMFSILSGPTIAAISVVFDNAENAEVYQTCMDGFIAVAKISAYYHLENILDDLVVSLCKFVTVFDPLAVEESILAFGEDMKARMATETVFTIANRYGDFIRTGWRNILDCILKFHKLGLLPTRIASDAAEESELSTETEDGGKRTINALSLSRLPSVNTTKRSSGLMSRFSQLLYLGAEEPKSVPSEEQLAAQQCTLQTIQKCHIDSIFSESKFLQAESLLQLAKAITSAGVRPKKGNSTSEDEDTLVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRLLPYKENITDELLRSLQLVLKLDARVADAYYEQITQEVSHLMKANASHIRSHLGWRTITSLLSITARHLEAAEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVMALDLMSGSVSCLEKWTNDAKQATKEEELAKVLQDIGDMWLRLVQGLKKLCLDQREEVRNHALLSLQKCLTGSVGINLPHSLWLQCFDQVIFSVLDDLIEISQTQSQKDYRNIEGTLVLALKLLCKVFLQLIQYLSELPDFSTLWLAVLSRLETYMKVKIRGRRSEKLHELVPELLKNTVLVMKTGQVLVRSDSVDGSSLWELTWLHINNISPSMQVEVFPESDSKDLQKKQTEKVEGLVSDENNSVSSNETAGQDGPGCPGSLQVIDYAELLRSHSHLHWDS 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01025 1566 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 142 1508 - -
Vimu1g01025 1566 MobiDBLite consensus disorder prediction 325 345 - -
Vimu1g01025 1566 ProSiteProfiles SEC7 domain profile. 631 820 IPR000904 GO:0005085|GO:0032012
Vimu1g01025 1566 MobiDBLite consensus disorder prediction 1522 1539 - -
Vimu1g01025 1566 SUPERFAMILY ARM repeat 423 1435 IPR016024 -
Vimu1g01025 1566 CDD Sec7 639 822 IPR000904 GO:0005085|GO:0032012
Vimu1g01025 1566 MobiDBLite consensus disorder prediction 1505 1545 - -
Vimu1g01025 1566 Gene3D - 715 832 IPR023394 -
Vimu1g01025 1566 FunFam ARF guanine-nucleotide exchange factor GNOM 632 714 - -
Vimu1g01025 1566 FunFam ARF guanine-nucleotide exchange factor GNOM-like 714 832 - -
Vimu1g01025 1566 MobiDBLite consensus disorder prediction 1506 1521 - -
Vimu1g01025 1566 Gene3D - 632 714 - -
Vimu1g01025 1566 SMART sec7_5 635 822 IPR000904 GO:0005085|GO:0032012
Vimu1g01025 1566 Pfam Sec7 domain 639 822 IPR000904 GO:0005085|GO:0032012
Vimu1g01025 1566 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 392 553 IPR032691 -
Vimu1g01025 1566 SUPERFAMILY Sec7 domain 638 823 IPR035999 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01025 Vimu-Chr1 7470049 7477042 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01025 K18443 - gmx:100784083 2665.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01025 1 7470049 7477042 Vimu6g01807 6 16350361 16355383 PCT