Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00950 ATGAAGGGTGGGAGCCGTTTCTTCACCATAGCTCTGGTCTCCGCCTGGTACGCCACCAACATTGGGGTTTTACTACTCAACAAGTACCTTCTCAGTAACTATGGCTTCAGGTACCCTATATTCCTCACCATGTGCCACATGACCGCTTGCTCCCTCTTCAGCTACGTCGCCATCGCCTGGCTCAAGCTCGTTCCCATGCAGACCATACGCTCCCGCCTCCAGTTCCTCAAGATCGCGGCTCTCAGCCTCGTCTTCTGCGTCTCCGTCGTCTTCGGCAACGTCTCCCTCCGCTACCTCCCCGTCTCCTTCAACCAGGCCATCGGCGCCACCACTCCCTTCTTCACCGCCGTCTTTGCCTATCTCATCACCTTCAAGAGAGAGGCCTGGCTCACCTACCTCACTCTCGTCCCCGTCGTCGCCGGCGTCGTCATTGCCAGCGGGAGTGAACCGAGCTTCCATTTATTTGGATTCATAGTATGTGTTGCAGCTACAGCTGCCCGAGCCTTAAAATCCGTGTTGCAAGGAATTTTACTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTTCTTTACATGGCTCCAATTGCTGTTGTTTTCCTTCTCCCTGCCACACTAATGATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCTTATCTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTGCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTATTCATTCACAGTCCTTGGAGTAGTACTCTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 921 0.4973 MKGGSRFFTIALVSAWYATNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLFSYVAIAWLKLVPMQTIRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTYLTLVPVVAGVVIASGSEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLMMEENVVGITLALARDDVKIIWYLLFNSALAYLVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSFTVLGVVLYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00950 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 300 - -
Vimu1g00950 306 PANTHER SOLUTE CARRIER FAMILY 35 11 303 - -
Vimu1g00950 306 Pfam Triose-phosphate Transporter family 11 299 IPR004853 -
Vimu1g00950 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00950 Vimu-Chr1 6701857 6704801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00950 3 306 Organic Solute Cotransporters AT3G11320 90.132 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00950 - - gmx:100806704 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01768 6 16034145 16040377 Vimu1g00950 1 6701857 6704801 ECH
Vimu1g00950 1 6701857 6704801 Vimu1g00950 1 6701857 6704801 ECH
Vimu6g01768 6 16034145 16040377 Vimu1g00950 1 6701857 6704801 PCT