Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04334 ATGGCTAATGATGCCCCTTATGTTTTTGCGGTTGGAATTATGGGTAACCTAGTCTCCTTCTGTTGCTTTCTAGCACCAGTACCAACGTTTTATCGAGTTTGTAAGAAGAAAACAACAGAAGGTTTCCAATCACTACCTTACGTTGCTGCACTCTTCACCTCAATGCTTTGGATTTTTTATGCTTACATAAAGACAGGAGAAATACTTCTTATCACCATCAACGCATTTGGTTGTTTCATAGAGACAGTTTACCTTGTCATCTATATAACTTACTGTCCCAGGAAAGCTAGGTTTTTTACCTTCAAGATGATTTTCTTGTTCAACGTTGGAGTCATTTTCTTGGTTGTTCTTCTCACTCACGTTCTAGCAAAAGAACGAACAGCCCGTATTGAGCTTCTTGGATGGATTTGTGTAGTTCTTTCTACCAGTGTTTTTGCAGCACCTTTGAGCATCATTAAAGTGGTTATTCGCACCAAAAGTGTAGAGTTCATGCCTATTACTCTGTCACTTCTTCTCACAGTGAGTGCAATTATGTGGATGGCATACGGTATTCTCCTGAGGGACATCTATGTTACACTTCCGAACTTCGTGGGTATCACATTTGGAACAATTCAGATAGTGCTGTATTTTATATACAGAAAGCACAAGCCAGGTAAGGATGAAAAGCTGCCAGAAGAGAAAGACAATGCTACGAATGAAGAAAACGCCAACACAACAGTGAGCAGTGAGAATCATGCAGCAAACAGTGGTGGATTTGTTGATATTGAGATTGGAGAGAAGAAGGAAGTGAAGAAAGTTGAGGAAGCACAGAAAAAACCGGACCATACAGAAAACAAAACAAGGGAAGCTAGCAGTCAACTACAACATAATTAA 873 0.3975 MANDAPYVFAVGIMGNLVSFCCFLAPVPTFYRVCKKKTTEGFQSLPYVAALFTSMLWIFYAYIKTGEILLITINAFGCFIETVYLVIYITYCPRKARFFTFKMIFLFNVGVIFLVVLLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPITLSLLLTVSAIMWMAYGILLRDIYVTLPNFVGITFGTIQIVLYFIYRKHKPGKDEKLPEEKDNATNEENANTTVSSENHAANSGGFVDIEIGEKKEVKKVEEAQKKPDHTENKTREASSQLQHN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04334 290 MobiDBLite consensus disorder prediction 219 290 - -
Vimu11g04334 290 MobiDBLite consensus disorder prediction 255 284 - -
Vimu11g04334 290 Gene3D - 128 222 - -
Vimu11g04334 290 PANTHER RAG1-ACTIVATING PROTEIN 1 17 231 IPR047664 -
Vimu11g04334 290 FunFam Bidirectional sugar transporter SWEET 129 221 - -
Vimu11g04334 290 FunFam Bidirectional sugar transporter SWEET 9 97 - -
Vimu11g04334 290 MobiDBLite consensus disorder prediction 233 248 - -
Vimu11g04334 290 Gene3D - 9 98 - -
Vimu11g04334 290 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016020
Vimu11g04334 290 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04334 Vimu-Chr11 64656654 64658273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04334 7 259 Miscellaneous Gene Families AT5G23660 48.507 3.53e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04334 K15382 - gmx:100801430 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04334 11 64656654 64658273 Vimu10g01462 10 15796910 15798769 PCT