Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04298 ATGGAGCTGGAGAAGCTTTATTCCAGTGGCCAAGGAGGAAATTTGTATTTGTCTGCTGCTCCTGGTCATAATTCTCATAACAAGGGCCGATTATACGTGGAAAAATATGCTGAAAGTGTTCAATATTCTTTCTTGGATTACTTGGCTGGGGGGTTTGAATTGAACTTCATGGTGGCTGTTGATTTTACAGCATACATTGACCTTTATGGGCTTGGCTGGAGTCGTCTTGTCGAGAAGTCAGTGTTGATTGGTCCTCAAGACAAGTTCAATGAGTTGAAAATGATGACACTTGTGATGGCATTACATATGACCAAGGTTTCCCTGGATAAGTACCATATAGGTGTTCATAGGATGATTTATTATGAAGAACTTGAGATAGAATTCTTTTATAATGTACAGAGCATGAAGGACACTATGTTGAACACTGCCATTTTGCTGAAGTGTTTTCGTAATGGATAA 459 0.3922 MELEKLYSSGQGGNLYLSAAPGHNSHNKGRLYVEKYAESVQYSFLDYLAGGFELNFMVAVDFTAYIDLYGLGWSRLVEKSVLIGPQDKFNELKMMTLVMALHMTKVSLDKYHIGVHRMIYYEELEIEFFYNVQSMKDTMLNTAILLKCFRNG 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04298 152 PANTHER COPINE 2 64 IPR045052 GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04298 Vimu-Chr11 64335636 64337039 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04298 - - vra:106768925 120.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04298 11 64335636 64337039 Vimu10g01640 10 21004808 21015055 PCT