Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04250 ATGCAAGAGACGCTCCTCACTCTCCCTCTCTCTCACCACCAAGACATCCACATTCGGGCCAAGAAGAAAAAGCCGCAGCAGCCGGGAAGCGGACATAGCAGCAGCAACAGCAGTAGCAGCGGCGGCCACTCCACCACTCGCGTGTCGCGGCGCGTGAGTCCTGTCGGTGAGAAGTCTCTGCCCAACGGGGACATCTACAGCGGCACCCTGTCGGGGAACGCGCCGCACGGCACCGGGAAGTACCTCTGGTCCGATGGGTGCATGTACGAGGGGGAGTGGCGAAAGGGGAAAGCATGCGGCAAAGGGAGGTTCTCGTGGCCCTCCGGCGCCACCTACGAGGGGGAATTCAAGTCGGGTCGGATAGACGGGTTCGGATCCTTCATCGGCGTCGACGGCGACATGTACAGAGGGTCCTGGATGGCCGACAGAAAGCACGGGTTCGGCGAGAAACGATACGCTAATGGGGATGTGTATGAAGGTTGGTGGAGGTGCAACTTGCAGGAGGGGGAGGGGAGGTACACATGGCGGAACGGCAACGAGTACGTGGGGGAGTGGAGGGGTGGTGTGATTTCGGGGAAGGGTGTTCTGGTGTGGGCGAATGGGAACCGTTACGAGGGGTTTTGGGAGAATGGTGTGCCTGTGGGGAAGGGTGTTTTCACGTGGTGTGATGGGAGCACGTGCGCGGGGAACTGGGGGAAGGAGTTTATGGAAGAGGCACGTGAGGAGAAGATGAAGAGGAGTTCGGTGGATGGGTGTAGGAGTGTGAGCTTTCCCAGGATTTGTATTTGGGAGTTGGATGGAGAAGCTGGGGACATCACCTGTGACATTGTTCACAATGCTGAGGCTTCTCTGTTCTACAGGGATGGCACCACTGCCAGTGAGTCTGAGAACGGTGGATATGATATTATTGTTAATAATAATAATAATAATGGGTGTGGGGTTTTGCAGAAGAGTCCTTGTTGGTCTCTTGATGGTTCTGGTGGTGAGGTTAAGAAGCCTGGTCAAACTGTGTCCAGAGGGCACAAGAGTTATGATCTCATCCTTAATCTTCAACTGGGTATCAGATACACTGTTGCCAAGCATGCTTCTATAGTGAGAGAGCTTAGACCAGGAGATTTTGATCCCAAGGAGAAGTTCTGGACGAGGTTCCCACCTGAAGGGTCTAGGTTTACGCCCCAGCATCATTCAGTGGACTTCAGGTGGAAAGACTACTGCCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACACGCTTGCTATTTGCGGAAGTGACTCACTTAGGGAGATGTCTTCTCCGGGAAAAAGTGGAAGCATCTTTTATCTCACTCAAGACGACCGCTTCATAATTAAGACTGTCAAGAAGTCTGAAGTCAAGGTGCTCATTAGAATGCTTCCAAGCTACTACCAACATGTTTGTCAGTACAAAAATTCCTTGGTGACTGCATTCCTGGGCGTGCATTGTGTCAAACCTGTTGGAGGTCAAAAGACCCGGTTTATTGTAATGGGCAATGTGTTTTGCTCCGAGTACCGGATCCACAAGAGGTTTGACCTCAAAGGTTCTTCTCATGGTCGAACAACGGATAAGCCAAGGGAGGAGATTGATGAGACTACCACTCTCAAAGACCTTGATCTTAATTTTGTCTTTCGCCTGGAACAGTCTTGGTTTCAAGAGCTTATACGGCAAGTCGATAGAGACTGTGAGTTCTTGGAAGCAGAGGGAATCATGGATTACAGTCTTCTAATTGGCCTGCATTTTCGTGATGATTGCTCGGTTGATGAAATGAAAAGTTCACCACGCAATTCATATTCAGGTAAGCGAGACATGCTTGATGATGAGATGCTCACATGCCGGGGACCTCTGATCCGGTTGGGAATGAACATGCCTGCCAGAGCCGAGAGTGTGTATAAGGGTGGATTGGATCAGGCAGCGGGTAGTGGAAGTGGCAATTCATGTTGTATCACTTCAGAGAGTAACAACAACAGGCAGATATCTGATGTAATCCTCTACTTTGGTATCATTGACATTCTCCAAGACTACGATATAAGCAAAAAGATAGAACATGCATACAAGTCGCTACAAGTGGACTCCACCTCTATCTCAGCTGTTGATCCCAAGCTGTACTCCAAAAGGTTCAGGGATTTCATACACAGAATCTTTGTGGAGGATAAATGA 2193 0.503 MQETLLTLPLSHHQDIHIRAKKKKPQQPGSGHSSSNSSSSGGHSTTRVSRRVSPVGEKSLPNGDIYSGTLSGNAPHGTGKYLWSDGCMYEGEWRKGKACGKGRFSWPSGATYEGEFKSGRIDGFGSFIGVDGDMYRGSWMADRKHGFGEKRYANGDVYEGWWRCNLQEGEGRYTWRNGNEYVGEWRGGVISGKGVLVWANGNRYEGFWENGVPVGKGVFTWCDGSTCAGNWGKEFMEEAREEKMKRSSVDGCRSVSFPRICIWELDGEAGDITCDIVHNAEASLFYRDGTTASESENGGYDIIVNNNNNNGCGVLQKSPCWSLDGSGGEVKKPGQTVSRGHKSYDLILNLQLGIRYTVAKHASIVRELRPGDFDPKEKFWTRFPPEGSRFTPQHHSVDFRWKDYCPMVFRHLRELFAIDPADYTLAICGSDSLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLPSYYQHVCQYKNSLVTAFLGVHCVKPVGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLNFVFRLEQSWFQELIRQVDRDCEFLEAEGIMDYSLLIGLHFRDDCSVDEMKSSPRNSYSGKRDMLDDEMLTCRGPLIRLGMNMPARAESVYKGGLDQAAGSGSGNSCCITSESNNNRQISDVILYFGIIDILQDYDISKKIEHAYKSLQVDSTSISAVDPKLYSKRFRDFIHRIFVEDK 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04250 730 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 428 725 IPR002498 GO:0016307|GO:0046488
Vimu11g04250 730 CDD PIPKc_AtPIP5K_like 343 725 - -
Vimu11g04250 730 MobiDBLite consensus disorder prediction 27 52 - -
Vimu11g04250 730 SMART PIPK_2 369 727 IPR002498 GO:0016307|GO:0046488
Vimu11g04250 730 MobiDBLite consensus disorder prediction 1 71 - -
Vimu11g04250 730 SMART morn 156 177 IPR003409 -
Vimu11g04250 730 SMART morn 110 131 IPR003409 -
Vimu11g04250 730 SMART morn 87 108 IPR003409 -
Vimu11g04250 730 SMART morn 133 154 IPR003409 -
Vimu11g04250 730 SMART morn 64 85 IPR003409 -
Vimu11g04250 730 SMART morn 179 200 IPR003409 -
Vimu11g04250 730 SMART morn 202 223 IPR003409 -
Vimu11g04250 730 PIRSF PIP5K_plant 234 730 IPR017163 GO:0005524|GO:0016308
Vimu11g04250 730 PIRSF PIP5K_plant 3 246 IPR017163 GO:0005524|GO:0016308
Vimu11g04250 730 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 75 727 IPR023610 -
Vimu11g04250 730 Gene3D - 511 726 - -
Vimu11g04250 730 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 329 510 IPR027484 -
Vimu11g04250 730 Pfam MORN repeat 66 88 IPR003409 -
Vimu11g04250 730 Pfam MORN repeat 135 157 IPR003409 -
Vimu11g04250 730 Pfam MORN repeat 112 134 IPR003409 -
Vimu11g04250 730 Pfam MORN repeat 158 179 IPR003409 -
Vimu11g04250 730 Pfam MORN repeat 181 203 IPR003409 -
Vimu11g04250 730 Pfam MORN repeat 204 226 IPR003409 -
Vimu11g04250 730 Pfam MORN repeat 89 110 IPR003409 -
Vimu11g04250 730 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 61 188 - -
Vimu11g04250 730 SUPERFAMILY SAICAR synthase-like 340 726 - -
Vimu11g04250 730 Gene3D - 188 256 - -
Vimu11g04250 730 Gene3D - 141 187 - -
Vimu11g04250 730 Gene3D - 55 95 - -
Vimu11g04250 730 Gene3D - 96 140 - -
Vimu11g04250 730 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 338 726 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04250 Vimu-Chr11 63919392 63923308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04250 48 729 Acyl Lipid Metabolism Gene Families AT1G21980 64.444 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04250 K00889 - gmx:100789188 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04250 11 63919392 63923308 Vimu10g01858 10 26559506 26563301 PCT