Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01858 ATGCAAGAGACACTATTCACACTGTCGAAGCAACAAGAGGACAACAACGCAACCACAAAGGACATCGAGCTCCTACTGCCACCGCCGTTGTGCCGCCGTCCAACGAGGACGCGCCGGGTTTCTCCCGAGACTGTGGAGAGGGCGCTCCCGAACGGATATATCTACAGCGGAAGCCTCTCGAGAAACGCGCTGCTCGCCAGTGGGAAGTACCTCTGGTTGGACGGGTGCATGTACGAGGGAGGGTGGAGGAAGGGAAAGGCGTGCAGCAAGGGGCGATTCTCCTTGCCCTCTGGTGCAACCTACAAGGGCGAGTTTGCTGCCGGGAGGACGCACGGCCCCGAGACCTTCGTCGGCGTCGACGGGGAGATGTATCGCGATGCGCGGCTCTCGGACAGGAAGCACGGGTTCGGGGAGAAGCGGTACGCGAACGGCGACGTGTACGAGGGCTGGTGGCGGTGCAACCTGCAGGAGGGGGAGGGAAGGTACACGTGGCGGAACGGGAACGAGTACGTCGGGGAGTGGAAGAATGGCGCCATATCTGGGAAGGGCGTGCTTGTGTGGAAGAACGGGAACCGTTACGAGGGGTGTTGGGAGAACGGGGTTCCCAAAGGGAGAGGCGTCTTCACATGGCGCGATGGGAGCACCTCCTCTGGGAATTGGGGGAAGGAGTTTGTCAATGAGAAACGTGTGTCGGTGGATGAGTGTTGTAACAACAACAACAACATAAAGAGTGTGAGTTTTCCCCGGATTTGCATTTGGGAGCTTGATGGCGAGGCTGGGGATATCACTTGTGACATTGTGGAGGCTTCTGTGTTTTATGGTGGTGGTGGTGGTGGAGGAGGCACAGGGTGTGAGAGTGATGTGCAGTTACAGAGGAGTCCTTGTGGTTCTGTTGATGGGGATGTTAAGAAGCCTGGTCACACTGTTTCCAAAGGGCATAAGAATTATGATTTGATGCTCAATCTTCAACTGGGTATTAGATACTCTGTCGGAAAGCATGCTTCTGTTTTGCGAGAGCTTAGGCCCGGGGATTTTGATCCGAAGGAGAAGTTCTGGACGAGGTTCCCCCCGGAGGGGTCTAAGTTTACACCTCCTCATCAATCTGTGGACTTCAGGTGGAAAGATTATTGTCCTATGGTGTTCAGACATCTAAGGGAATTATTTGGAATAGATCCTGCGGATTACATGCTTGCTATTTGCGGCAATGACACACTGAGGGAGATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAGGACGACCGGTTCATTATCAAAACCTTGAAGAAGTCTGAAGTCAAGGTGCTCACCAGGATGCTTACCAGTTACTATCAACATGTGTGTCAGTACAAGAATTCGCTGGTAACAAAATTTTTGGGGGTTCACTGTGTCAAACCAATTGGAGGTCAAAAGACTCGGTTTATTGTGATGGCCAATGTATTTTGTTCGGAGTATCGGATCCATAGGCGGTTTGACCTCAAAGGTTCTTCTCATGGTCGAACAACCGATAAACCTCGGGAGGAGATCGATGAGACTACCACTCTAAAAGACCTTGATCTTTGTTTTGTCTTCCGCCTGGAACAGTCTTGGTTTCAAGAGCTAAAGTGGCAACTTGATAGAGACTGTGAATTCTTGGAAGCCGAGGGAATAATGGATTACAGTTTTTTGATTGGCCTTCATTTCCGTGATGATAGCTCAGTTGATGACGGGAAGAGTTTAACCAATGAGTTGTGTTCAGGCAAGAGAGACATGCAAAATGATGACACACAAGATATGAAGTGGATACCCATAGGCCGTGGACTTCTAATTCGACTGGGAACAAACATGCCTGCCAGAGCTGAGAGAGTGTGTAAAGCTGGGTTGGATCAGCACACAGGTACTGGAAGTAGCAATTCTACCCCTTCAGAGAGTGGTGGTGAGGTCTCTGATGTAATCCTATACTTTGGCATAATTGACATTCTCCAAGATTATGATATAAGCAAAAAGCTAGAGCATGCATACAAGTCTCTGCAAGTGGATCCCTCCTCCATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACATAGAATCTTTGTGGAGGACAAATGA 2115 0.5017 MQETLFTLSKQQEDNNATTKDIELLLPPPLCRRPTRTRRVSPETVERALPNGYIYSGSLSRNALLASGKYLWLDGCMYEGGWRKGKACSKGRFSLPSGATYKGEFAAGRTHGPETFVGVDGEMYRDARLSDRKHGFGEKRYANGDVYEGWWRCNLQEGEGRYTWRNGNEYVGEWKNGAISGKGVLVWKNGNRYEGCWENGVPKGRGVFTWRDGSTSSGNWGKEFVNEKRVSVDECCNNNNNIKSVSFPRICIWELDGEAGDITCDIVEASVFYGGGGGGGGTGCESDVQLQRSPCGSVDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVLRELRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPMVFRHLRELFGIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLTRMLTSYYQHVCQYKNSLVTKFLGVHCVKPIGGQKTRFIVMANVFCSEYRIHRRFDLKGSSHGRTTDKPREEIDETTTLKDLDLCFVFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDSSVDDGKSLTNELCSGKRDMQNDDTQDMKWIPIGRGLLIRLGTNMPARAERVCKAGLDQHTGTGSSNSTPSESGGEVSDVILYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFIHRIFVEDK 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01858 704 PIRSF PIP5K_plant 6 231 IPR017163 GO:0005524|GO:0016308
Vimu10g01858 704 PIRSF PIP5K_plant 222 704 IPR017163 GO:0005524|GO:0016308
Vimu10g01858 704 SMART PIPK_2 341 701 IPR002498 GO:0016307|GO:0046488
Vimu10g01858 704 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 312 700 IPR002498 GO:0016307|GO:0046488
Vimu10g01858 704 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 400 699 IPR002498 GO:0016307|GO:0046488
Vimu10g01858 704 Pfam MORN repeat 170 192 IPR003409 -
Vimu10g01858 704 Pfam MORN repeat 147 168 IPR003409 -
Vimu10g01858 704 Pfam MORN repeat 78 99 IPR003409 -
Vimu10g01858 704 Pfam MORN repeat 193 215 IPR003409 -
Vimu10g01858 704 Pfam MORN repeat 131 146 IPR003409 -
Vimu10g01858 704 Gene3D - 483 700 - -
Vimu10g01858 704 SMART morn 76 97 IPR003409 -
Vimu10g01858 704 SMART morn 191 212 IPR003409 -
Vimu10g01858 704 SMART morn 168 189 IPR003409 -
Vimu10g01858 704 SMART morn 99 120 IPR003409 -
Vimu10g01858 704 SMART morn 145 166 IPR003409 -
Vimu10g01858 704 SUPERFAMILY SAICAR synthase-like 311 700 - -
Vimu10g01858 704 FunFam Phosphatidylinositol 4-phosphate 5-kinase 301 482 - -
Vimu10g01858 704 CDD PIPKc_AtPIP5K_like 315 699 - -
Vimu10g01858 704 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 301 482 IPR027484 -
Vimu10g01858 704 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 67 701 IPR023610 -
Vimu10g01858 704 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 120 223 - -
Vimu10g01858 704 Gene3D - 47 117 - -
Vimu10g01858 704 Gene3D - 172 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01858 Vimu-Chr10 26559506 26563301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01858 22 703 Acyl Lipid Metabolism Gene Families AT1G21980 63.561 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01858 K00889 - gmx:100808235 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04250 11 63919392 63923308 Vimu10g01858 10 26559506 26563301 PCT