Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04243 ATGGATTGGGTGCAAGCGAGGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTATTGATGTTTTGGACACTCTTGGGAGCAGCATGACAAATTTAAGTGGTGGAGGGTTTGTATCTGGTGCTGTGATGAAGGGGAATGAAATTGGTATTTTAGCATTTGAAGTTGCAAACACGATTGTCAAGGGCTTTAGTCTTATGGAATCTCTTTCAGCAAAAAGTATTAAGCACTTAAAAGAAGAGGTTCTTCCGTTAGGGGGTGTGCAAGATTTGGTGTCAAAGGATATGGATGAACTTCTCAGGACTGTTGCTGCAGATAAGAGGTAA 327 0.4343 MDWVQARVSEVSLRLGRAGIDVLDTLGSSMTNLSGGGFVSGAVMKGNEIGILAFEVANTIVKGFSLMESLSAKSIKHLKEEVLPLGGVQDLVSKDMDELLRTVAADKR 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04243 108 PANTHER OS01G0873900 PROTEIN 7 108 IPR045021 GO:0045927
Vimu11g04243 108 Pfam Domain of unknown function (DUF3475) 51 107 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04243 Vimu-Chr11 63866884 63874635 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04243 - - gmx:100800289 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04243 11 63866884 63874635 Vimu11g04243 11 63866884 63874635 ECH
Vimu11g04243 11 63866884 63874635 Vimu10g01856 10 26526123 26536962 PCT