Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04212 ATGTTTATAGTGGATATCAATGATCCTTCATCTGATTCCTTTCCCTTTGACTCCAATAGAGACACCTTGTCTGTGGAAATCAAACATGCTTTCGCAGGAGAGGGTATTTCAAATGGTTATGGCTTCAGATACCCTGGATCAAAGCCCGGTTCCCTTTTTGTATTTGAAAATGGTGTCCTTGCCTTTGTTTGGAAGGACACTAGGGTTGTCTTGACTTTGCAAAGACTCGACTTGCAACAACTTTTGAAGAAAGGAGAGAGAGTACCCTCTCTCCCTCCCATCAGCAATTTTTCTTATTTGACCAAGTCCTACTCAAATGTTTTCACAGGCTTTCCTAGTTCTTCCACTTCCTCTCCTTCACCAAGGTAA 369 0.4201 MFIVDINDPSSDSFPFDSNRDTLSVEIKHAFAGEGISNGYGFRYPGSKPGSLFVFENGVLAFVWKDTRVVLTLQRLDLQQLLKKGERVPSLPPISNFSYLTKSYSNVFTGFPSSSTSSPSPR 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04212 122 Pfam Cyclin D1 binding domain 29 79 - -
Vimu11g04212 122 PANTHER F-BOX PROTEIN FAMILY-LIKE 1 121 IPR040275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04212 Vimu-Chr11 63613775 63621933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04212 - - gmx:100779818 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04212 11 63613775 63621933 Vimu11g04212 11 63613775 63621933 ECH
Vimu11g04212 11 63613775 63621933 Vimu10g01824 10 25825071 25832728 PCT