Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04185 AGGCGGTGGAGAGAAACAATGGCGAGTTCCGATCATACACTGAATCGGCGTCCATCAAGAAGCGCCGCAACCACGACATTTTCTTCTGAGGTATTCGACAACGAAGTTGTGCCGTCATCACTCGCCTCCATCTCGCCAATTCTCAGAGTCGCCAATGAGATAGAGGGCGAGCGTCCTAGGGTTGCTTATCTCTGTCGGTTCTATGCTTTTGAGAAAGCACATAGGCTGGACCAGAGTTCCAGCGGTCGTGGTGTTAGGCAGTTTAAGACCTTGTTGCTACAACGATTGGAGAGGGACAATCCAAAAAGTCTTACTTCTCGGGTTAAGAAGACGGATGCAAGAGAAATTCAGTCCTATTATCAGCAATACTACGAACACTATGTCAGAACTCTCGATCAGAAGGAGCAAGCTGACAGAGCCCAACTCAGCAAAGCTTACCAGACTGCCGGGGTTCTATTTGAAGTGCTCTGTGCGGTAAATAAGACTGAGAAGGTCGAAGAAGTTGCTCCTGAGATTATTGCCGCAGCAAGAGATGTCCAGGAGAAGACGGAGATTTATACGCCTTATAATATTCTTCCTCTGGATGCTGCTGGGGCTTCCGTGCCAATAATGCAATTTGAAGAGATCAAGGCTTCTGTCTCTGCACTTTGGAACACTCGTGGCTTGAACTGGCCTAATTCATCTGGGCTACAGAGGCAGAAAACTGAAGATTTAGACTTGCTTGATTGGCTTAAAGCTATCTTTGGTTTTCAGAGGGATAATGTCAGGAATCAGAGGGAGCATCTGGTTTTGCTTCTTGCTAACAGTCATATAAGGCTACATCCTAAACCCGAGCCTTTCAACCTGGCATTCAGAGTACTCTACTCTACTTCTGGCCAGAAGTTATATTTGTTTTCATTTGTTTTCCTTTTGGTTTTATCAAATCAGCTGGATGATCGTGCTATAGATTCAGTGATGAAAAACCTTTTTAAGAATTACAAAATGTGGTGCAAATTCCTAGGACGAAAACACAGCTTACGACTTCCTCAAGGTCAGCAAGAGACACAGCAACGGAAGTTGCTTTATATGGGGTTGTATCTTCTTATATGGGGTGAAGCATCCAACGTTCGCTTCATGCCTGAGTGTCTGTGCTACATATTTCACAACATGGCATATGAACTCCACGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAGCCTTCCTATGGTAGTGATGACGAGGCTTTCCTGTGCAAGGTTATAACTCCTTTGTACCGAGTGATTGAAAAGGAAGCCAAGAAGAGTCGACATGGAAAGGCTCCACACTCAGCATGGTGCAACTACGACGATCTAAACGAGTATTTCTGGTTGTCATCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGACGGTGAATTCTTTAAATCAACTAGTGATTTGGCACAGGGAAGAAAGGGTGCTCCAAGAAAATTTGGAAAAACTGTCAAATCAAATTTTGTTGAGACACGATCATTCTGGCACGTCTTCCGCAGCTTTGATCGTCTGTGGACATTTTTTATACTGGGTTTGCAGGTGATATTCATTATTGCTTGGGAAGGGATTACACTGTCGAATATATTTCATAAGGAAGTTTTATATTATCTCTCAAGCATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCATCGATGCAAATTCAGTGATGTGCTAAGAAATATTCTTAAAGTCTTCGTCACTCTTTTTTGGGTTATCATTCTCCCACTCTTCTATGTTAATTCCTTCAAGGGTGCACCTGGGGGTCTGAAGCAGTTGCTTCCCTTTTTCAGTCAAATAAAAGGCATTCCACCACTTTACATAATGGCTGTTATATTATATTTGCTTCCAAATTTACTGGCTGCTATTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAGACTGGCGCATAGTTAGATTCTTCTTGTGGTGGTCTCAGGTACACTATATTCTGGTTGTTGCTTTTGACTTGCAAATTTTTATTCAGTTTTTTTGTCCAGCTCGAAATAACTATGGGGCAATAATTGCACTCTGGGCCCCTGTAATTTTGATACACACCCTGGTCATGCTAAGATCCCGGTTTCTGTCATTGCCTGGTGCATTCAACACATGCTTGGTTCCTTCTGATAAGAAACAAAAAGAGAGATTTTCTTTCTCAAAGAAATTCGCTGAGATTTCTGCAAACAAAAGAAGCGAAGCTGCCAAATTTGCCCAAATATGGAATGAGATTATCTGTTGTTTCCGTGAGGAAGATCTCATAAGTGATAGGAAAGGACCTCAGGAGATGGATCTTTTGCTAGTTCCTTACTCATTGGGTCATTGTCTGAAAATAATTCAGTGGCCGCCATTTTTGCTTACAGGGAAGATTACTGTGGCACTGGATATTGCTACTCAGTTTCGAGGGAGGGACTCTGACCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTTCTGTGATTGAATGCTACGAATCCTTTAAACATTTTCTACAGGATTTGGTGATAGGGGAAACTGAAAAAAGAATAATTTCCATCATCATTAAAGAAGTCGAGAGCAACATCTCAAAGAATACTCTTCTTACAAACTTCCGTATGGTCTATTTACCTTCCCTTGTTAAGAAGTTCGTGGAACTTGTGGAATTTTTGAAAAATGGAGATCCATCCCAGCAGGGTGCTGTTGTGGTTTTGCTGCAAGACATGTTAGAAGTGGTTACCGACATGATGGTGAATGAAATCAGCGAATTGGCAGAACTTAATCAAAGTAGCAAGGACACTGGACAACAAATTTTTGCTGGTAGAGAGGGAAAACCCGCAATTCGTTTCCCACCTGTGGTTACAGCGCAATGGGAGGAACAGATAAGACGTCTTTATCTACTCTTGACTGTGAAAGAATCTGCCGTTGATGTTCCAACAAACACCGAAGTACGAAGAAGGGTTACATTCTTTAGCAATTCATTGTTCATGGATATGCCACATGCTCCTCGAGTACGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTATATTCTAAGAATGACATTGAGTTTGAGAATGAAGATGGCGTGTCAATCATATATTACCTTCAGAAGATATTCCCTGACGAATGGAATAACTTCTTGGAGCGACTTGATTGTAAGAAAGATAGCGAGATATGGGAGAAAGATGAGAATATATTACATCTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGTAGGACAGTTAGGGGAATGATGTACTACAGGCGGGCAATAAAGCTCCAGGCATTTCTTGATATGGCTTCTGAAAAAGAGATACTCGACGGCTATAAAGCTATTGATGTTCCATCTGCGGAAGAAAAAGCGAGTCACAGATCCTTATATGCCAGTTTAGAGGCTATGGCTGACATGAAATTCACATACATTGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGTGGAGATCGCCGTGCAACTGATATCCTGAATCTGATGGTTAACTATCCCTCACTGCGTGTTGCATATATCGATGAACTTGAAGAAAGAGAAGATGGACAAGTGCATAAAGTTTATTATTCTGTATTGGTCAAAGCTGTTGACAATCTTGACCAAGAAATATATCGAATAAAGCTTCCGGGAGCGGCAAAGTTAGGAGAAGGAAAGCCAGAAAACCAAAACCATGCTATCATTTTTACTAGAGGGGAAGCTCTTCAGACTATCGACATGAACCAGGATAATTACTTAGAAGAAGCTCTGAAAATGCGTAACCTTTTGGAAGAATTTAACGAGGATCATGGATTGCGCGCACCCACCATATTAGGTGTTCGTGAGCATATTTTCACTGGAAGTGTCTCTTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGCCAAAGAGTTCTTGCTAGAACGCTAAAGGTTCGATTCCACTATGGCCATCCGGATGTTTTTGATAGAATTTTCCATTTTACCCGTGGAGGATTCAGCAAGGCTTCTTGTGGCATCAACCTAAGCGAGGATATATTTGCTGGATTCAACTCAACACTAAGACGTGGAAATGTTACTCATCATGAATACATTCAAGTTGGAAAGGGTAGAGATGTAGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGACAATAAGCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGAATGCTATCATTTTATTTTACAACTGTTGGATTTTATTTCAGCTCAATGATGGTGGCCCTCACGGTTTATGCTTTCCTGTATGGCAAATTTTACCTGTCATTGAGTGGACTTGAGGCTGCCATAATTAAGTTAGCCAGGAAGAAGGGAGATGATCCATTAAAGGCAGCAATGGCTTCACAGTCCCTTGTTCAAATTGGTATTCTGATGACTCTTCCCATGGTCATGGAAATTGGACTTGAGAGAGGATTCAGAACTGCTCTAAGTGAGATCGTAATAATGCACTTGCAGCTAGCACCCGTTTTCTTCACTTTCTCACTAGGAACTAAGATGCACTACTATGGGCGCACTCTCTTGCATGGTGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTTGTTCGTCATGAAAGGTTTGCGGAAAATTATAGGATGTATTCCAGGAGTCACTTTGTAAAAGGGATGGAGCTAGCTATTCTGCTTATATGTTATAGGCTTTATGGAAAAGCAACTCCTGATTCAGTATCATATGGCCTTCTCTCATTATCAATGTGGTTCTTAGTGTGTTCGTGGTTGTTCAGTCCTTTTCTTTTTAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGACAAAATGGATAAATAGTCAAGGTGGTATTGGTGTTCCTTCGAACAAGAGCTGGGAATCATGGTGGAATGAGGAACAGCAGCATCTGCTGCACACTGGGCTCTGGGGGAAGATTTGTGAGGTCATTCTTGCCCTGCGTTTCTTTGTCTATCAGTATGGGATTGTGTATCATCTTCATGTGGCTAGATCTGATAAGAGCATCACGGGTGTGACTGCACACACCTATCCATACTATATTCTAATATACGTTTTAGATGAAGAAGTTCCTTGCTCAGAAGAGAATTTATTTGTTTATCACCCTCCCTGGGTTTACGGTCTGTCCTGGCTAGTGGTAGTAGTCGCCATAATCATCTTGAAGGTCGCAATTTTGCATCTGAAACTCCAGATAGTATCCTTGGGTAGAAAGACGTTCAGTGCAGATTTCCAGCTGATGTTTCGTCTCCTCAAATTGTTTCTGTTTATTGGAATTGTTGTCATTCTCGTCTTGATGTTTACCCTACTGAGTCTCACAGTTGGTGACATCTTTGTGAGCCTCCTAGCCTTTATGCCGACAGGTTGGGCATTTATACAGCTGGTGTGTTTTATATATGAGAAGATAGGTCAAGCATGCAAGACGATGGTGAAGGCAATTGGAATGTGGGGGTCTATAAAAGCGTTATCAAAAGGATATGAATACGTGATGGGAGTGATTATCTTTGCACCAGTGGCCATATTGGCCTGGTTCCCATTTGTTTCAGAATTTCAAACTAGACTGCTATACAATCAAGCTTTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAATAA 5781 0.4203 RRWRETMASSDHTLNRRPSRSAATTTFSSEVFDNEVVPSSLASISPILRVANEIEGERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNPKSLTSRVKKTDAREIQSYYQQYYEHYVRTLDQKEQADRAQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPYNILPLDAAGASVPIMQFEEIKASVSALWNTRGLNWPNSSGLQRQKTEDLDLLDWLKAIFGFQRDNVRNQREHLVLLLANSHIRLHPKPEPFNLAFRVLYSTSGQKLYLFSFVFLLVLSNQLDDRAIDSVMKNLFKNYKMWCKFLGRKHSLRLPQGQQETQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGSDDEAFLCKVITPLYRVIEKEAKKSRHGKAPHSAWCNYDDLNEYFWLSSDCFSLGWPMRDDGEFFKSTSDLAQGRKGAPRKFGKTVKSNFVETRSFWHVFRSFDRLWTFFILGLQVIFIIAWEGITLSNIFHKEVLYYLSSIFITASILRLLQSILDLILNFPGYHRCKFSDVLRNILKVFVTLFWVIILPLFYVNSFKGAPGGLKQLLPFFSQIKGIPPLYIMAVILYLLPNLLAAILFLFPMLRRWIENSDWRIVRFFLWWSQVHYILVVAFDLQIFIQFFCPARNNYGAIIALWAPVILIHTLVMLRSRFLSLPGAFNTCLVPSDKKQKERFSFSKKFAEISANKRSEAAKFAQIWNEIICCFREEDLISDRKGPQEMDLLLVPYSLGHCLKIIQWPPFLLTGKITVALDIATQFRGRDSDLWKRICADEYMKCSVIECYESFKHFLQDLVIGETEKRIISIIIKEVESNISKNTLLTNFRMVYLPSLVKKFVELVEFLKNGDPSQQGAVVVLLQDMLEVVTDMMVNEISELAELNQSSKDTGQQIFAGREGKPAIRFPPVVTAQWEEQIRRLYLLLTVKESAVDVPTNTEVRRRVTFFSNSLFMDMPHAPRVRKMLSFSVLTPYYSEETVYSKNDIEFENEDGVSIIYYLQKIFPDEWNNFLERLDCKKDSEIWEKDENILHLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEKEILDGYKAIDVPSAEEKASHRSLYASLEAMADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNYPSLRVAYIDELEEREDGQVHKVYYSVLVKAVDNLDQEIYRIKLPGAAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGLRAPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARTLKVRFHYGHPDVFDRIFHFTRGGFSKASCGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTISRDIYRLGHRFDFFRMLSFYFTTVGFYFSSMMVALTVYAFLYGKFYLSLSGLEAAIIKLARKKGDDPLKAAMASQSLVQIGILMTLPMVMEIGLERGFRTALSEIVIMHLQLAPVFFTFSLGTKMHYYGRTLLHGGAKYRATGRGFVVRHERFAENYRMYSRSHFVKGMELAILLICYRLYGKATPDSVSYGLLSLSMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWTKWINSQGGIGVPSNKSWESWWNEEQQHLLHTGLWGKICEVILALRFFVYQYGIVYHLHVARSDKSITGVTAHTYPYYILIYVLDEEVPCSEENLFVYHPPWVYGLSWLVVVVAIIILKVAILHLKLQIVSLGRKTFSADFQLMFRLLKLFLFIGIVVILVLMFTLLSLTVGDIFVSLLAFMPTGWAFIQLVCFIYEKIGQACKTMVKAIGMWGSIKALSKGYEYVMGVIIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK 1926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04185 1926 Pfam 1,3-beta-glucan synthase component 997 1692 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vimu11g04185 1926 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 352 464 IPR026899 -
Vimu11g04185 1926 MobiDBLite consensus disorder prediction 1 20 - -
Vimu11g04185 1926 SMART FKS1_dom1_2 350 467 IPR026899 -
Vimu11g04185 1926 FunFam callose synthase 3 29 186 - -
Vimu11g04185 1926 Coils Coil 1273 1293 - -
Vimu11g04185 1926 Gene3D - 28 184 IPR023175 -
Vimu11g04185 1926 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 104 1921 - -
Vimu11g04185 1926 Pfam Vta1 like 43 170 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04185 Vimu-Chr11 63420063 63436330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04185 15 1926 Glycosyltransferase AT1G05570 54.918 0.0 2163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04185 K11000 - gmx:100777985 3200.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01750 10 24416756 24430800 Vimu11g04185 11 63420063 63436330 PCT