Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01750 CACCAGCATCCGGCTTCAGCTTCATCTGAAACCTCCTTTCTCCTCTATTCCCAGGGAACGTCGAGGTGGTGGGCAACGATGCCCGGTCCGGATGGGGCACCGTACACGCTGACGCGGCGCCCGTCGAGGAGTGGCGCCACGACGTTCTCCACAGAGGTTTTCGACAATGAGGTTGTTCCGTCTGCTCTCGCTTCCATTTCTCCGATTCTCCGAGTCGCCAATGAGATCGAAAGCGAACGTCCTAGGGTTGCTTATCTATGTCGGTTCTATGCTTTCGAGAAGGCGCACAGGTTGGATCAGAGCTCCAGCGGACGTGGTGTGAGGCAGTTTAAGACGCTGCTGTTGCAGCGATTGGAGAGGGACAATGCACACAGTCTTGCCCTTCGAGTTAAGAAGACAGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTCAGAGCTCTTGACCAAGGAGAACGGGCAGACAGAGCACAGCTCGGGAAAGCTTACCAGACCGCTGGGGTGCTTTTTGAAGTTCTTTGTGCCGTTAACAAGACCGAGAAGGTGGAAGAAGTAGCTCCTGAGATCATTGCTGCTGCAAGAGATGTCCAGGAAAAGACGGAAATATATGCACCTTTCAACATTCTTCCGTTGGACTCAGCAGGGGCTTCTCAGCCTATCATGCAGCTTGAAGAGATTAAGGCAGCTGTTTCGGCGTTCTGGAATACTCATGGCCTGAATTGGCCAACTTTATTTGAGCAACAAAGGCAGAGAAGTGGGGATTTGGATCTGCTTGATTGGCTTAGAGCCATGTTTGGATTCCAGAGGGACAACGTCAGGAACCAGAGAGAGCATTTAATTCTACTTCTTGCTAATGCTCACATAAGGCTAAACCCCAAACCTGAGACCCTTAACAAGCTCGATGATCGCGCCATTGATGCAGTGATGAATAAACTGTTTAAGAATTACAAAATGTGGTGCAAATTTTTGGGACGAAGACATAGCTTACGATACCCTCAAGGTCGTCAAGAGATACAACAAAGGAAGTTACTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTTTGCTACATATTTCATAATATGGCGTATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGGTGATGAGGCATTCTTGCGCAAGGTTATAACTCCTATATACCGAGTAATAGAAAAGGAAGCCAAGAAGAGCAGACATGGAGCAGCCCCTCACTCAGCCTGGTGCAACTATGATGATCTAAATGAATATTTCTGGTCACCTGATTGCTTTTCTCTGGGATGGCCCATGCGTGATGATGGTGAATTTTTTAGATCAACATTTAATATGACACAGGAAAGAAAGGGTGTTCAAAAAACATCTGGAAGAACTGGCAAAACAAATTTTGTTGAGACCCGATCATTCTGGAACATCTTCCGCAGCTTTGATCGTCTTTGGACCTTCTATCTGCTAGTTTTGCAGATGATGTTCATTATTGCCTGGGAAGGGATTTCATTGTTGGATATCTTTCAGAAAGAGGTCTTATATAAGCTCTCTAGCATATTCATTACAGCAGCCATTCTGCGCTTACTACAAAGTATCTTGGACCTGGCTTTGAACTTTCCAGGCTATCATCGTTGGAGATTCACTGATGTCCTACGAAGTTGTCTCAAAGTCGTTGTTAGCCTTTTCTGGGTTATTGCTCTTCCACTCTTCTATGTGCATTCCTTCAAGGATGCCCCTAACTTTATGAAGGATATGCTTTCCTTTCTTCATAGTATAAAGGGGATTCCACCATTGTATATGTTTGCAGTTGCAGTTTATCTGCTTCCAAATTTACTAGCAGCTGTTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATATTTAGATTTCTCTTATGGTGGTCACAGATCAAACCTCTGGTTCAGCCAACTAAGGACATAATGAGTATTCGGCATGTTGAATATGCCTGGCATGAATTTTTCCCTGAAGCTCAAAATAACTATGGTGCAGTTATTGCTCTATGGGCCCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATTCCATCTTTTCAACTATTTGCGGTGGTGTTATTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGACCATGCTGAGATCGCGGTTCCAATCATTACCTGGTGCATTCAACACATACTTGGTTCCTACTGACAAGAAGCAGAAGAAGAAATTTTCTTTATCCAAGCGATTTGACGAGATTTCTGCGAGCAGAAGGAGTGAAGCAGCTAAATTTTCTCAGTTATGGAATGAAGTTATCTGTAGTTTCCGTGAGGAAGATATCATAAGTGATAGGAAAGGCCATAGAACAAAACTCTTTAGTTACCTTTTTTATCCAAGCTTGAAAACAATTCAGTGGCCACCTTTTCTGCTTGCCAGCAAGATCCCTATAGCACTGGACATGGCAGCTCAATTTCGAGGAAAGGACTTCGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAGTGTGCTGTAATTGAATGCTATGAATCATTTAAAAACATCCTGCATGCTTTGATAGTAGGAGAAGCTGAAATGAGGACAATCTCTGTCATCATTAAGGAAGTTGAAAACAGCATCTATAAGAATACACTTCTCACAAATTTCCGAATGGGGTTTCTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAGATGCATCCAAACAAGGTACAGTGGTGGTCTTATTGCAAGACATGCTAGAAGTTTTTATACGTGATATGGTGGTAAATGAGAACAGTGAATTGGCAGAACTTTACCATAGTAGTAAGGATACTGGACGGCAACTTTTTGCTGGTACAGATGCAAAACCAGCTGTATTATTCCCTCCTGTAGTTACAGCACAATGGGACGAACAGATTAGACGTCTTCATTTACTTTTGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAATCTCGAAGCACGCAGAAGAATTGCATTCTTCACCAATTCATTGTTCATGGATATGCCACGTGCTCCACGAGTCCGAAAAATGCTATCCTTCAGTGTCTTAACTCCATACTACAGTGAAGAGACTGTCTACTCGAAGAATGATCTTGAGGTTGAAAATGAAGATGGCGTGTCTATCATATATTACCTGCAAAAGATCTACCCTGATGAGTGGAACAACTTCATGGAACGTCTTGGTTGTAAAAAAGATAGTGAGATATGGGAGAAAGATGAACACATATTACAGCTACGTCACTGGGCATCGTTACGAGGACAAACTCTTAGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCTATTAAGCTTCAGGCTTTTCTTGATATGGCAAATGAAAAGGAGATACTTGATGGCTATAAAGCTGTTACTGTCCCGTCCGAGGAAGATAGAAGGAGCCATAGGTCCTTATATGCTAGTTTAGAGGCCGTTGCAGACATGAAATTTACATACGTCGCAACCTGTCAGAACTATGGGAATCAGAAGCGTAATGGAGATCGCCGTGCGACAGACATTCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTGGCTTATATTGATGAAGTTGAAGAAAGAGAGGGAGGGAGAGTTCAGAAAGTTTATTACTCTGTACTAATCAAAGCTGTGGACAACCTTGACCAAGAAATATTTCGAATAAAACTACCGGGTCCAGCAAAGATAGGGGAAGGGAAGCCTGAGAATCAAAATCATGCCATCATTTTTACAAGAGGCGAAGCTCTTCAGACTATTGACATGAACCAGGACAATTACTTGGAAGAAGCTTTAAAAATGCGCAATCTTTTGGAAGAGTTTAATGAAGATCATGGGGTGCGACGACCTACAATATTAGGTGTACGTGAACACATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCACTGAAGGTGCGATTCCACTACGGTCATCCAGATGTTTTTGATAGAATTTTCCACATAACTCGAGGAGGATTTAGCAAGGCTTCTTGTGGAATCAATTTGAGCGAGGATATTTTTGCTGGATTCAACTCCATACTAAGACGCGGAAATATCACTCATCATGAATACATCCAATGCGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCTTGTGGTAACGGAGAACAGACATTAAGCAGAGATATCTACAGACTGGGGCATCGTTTTGACTTTTTCCGCATGCTATCATGCTATTTCACGACCATTGGATTTTATATAAGTTCAATGATTGTGGTCCTCACATGTTATGCATTCCTATATGGAAAACTATACCTGTCTTTGAGTGGATTTGAGGCTGAAATAGTAAAGTTGGCCAAGAGAAGGGGAAATGAACCGCTAAAGGCAGCATTAGCTTCCCAGTCTCTTGTTCAAATAGGAATCGTAATGACTTTGCCCATGTTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTATAGGGGATCTCATAATAATGCAGTTGCAGCTAGCACCTGTTTTCTTCACTTTCTCCCTAGGGACAAAGCTGCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAGTATAGAGCAACTGGCCGTGGTTTTGTTGTTCGCCATGAGAAATTTGCTGAAAATTACAGGATGTACTCTAGAAGTCACTTTGTTAAAGGGATTGAGCTCGCAATTTTGCTCATATGTTATTGGATTTATGGATCAGCCGCACCAGATTCAACAACATTTGGCCTTCTGTCGTGGTCAATGTGGTTTTTGGTCTGCTCATTCTTGTTTTCACCTTTCCTTTTCAATCCATCAGGGTTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGCAAAAGTGGATAAGTATTCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAGTCATGGTGGAATGAAGAACAGGAACATCTGCAGAACACTGGGTTTCTGGGGCGGATATGTGAGATTATTCTTGACCTGCGTTTCTTTGTCTACCAATATGGAATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGAGCATCTTGGTAATTATGCTTGCTAATTTGATTTCGTTTTATGTTTTCATGTCTGGAACCACACAACAGGCTTTAACTTATTTATCACCAATGTCTATACTACTAACTCCGATTGTGTCCATGGGTAGAAAGCAGTTCAGCGCAGACTTCCAGTTGATGTTTCGTCTTGTAAAATTGTTTCTGTTCATGGGAGCTATTGTTGTTCTAAGTTTAATGTTTACTCTGCTAAGTCTTACAGTTGGAGACATATTTGCGAGCCTCCTAGCCTTTTTGCCAACAGCATGGGCACTTATTCAGATAGCACAAGCATGCAGACCATTCGTGAAGGGCATTGGAATGTGGGGGTCTGTGAAAGCTTTAGCAAGAGGCTACGAATACTTGATGGGAGTGGTTATTTTTGCTCCGGTGGCCATATTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTGTTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCCGGCGGCAAGAAGGATAAGAAGAACTGA 5769 0.429 HQHPASASSETSFLLYSQGTSRWWATMPGPDGAPYTLTRRPSRSGATTFSTEVFDNEVVPSALASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNAHSLALRVKKTDAREIQAYYQQYYEHYVRALDQGERADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSAFWNTHGLNWPTLFEQQRQRSGDLDLLDWLRAMFGFQRDNVRNQREHLILLLANAHIRLNPKPETLNKLDDRAIDAVMNKLFKNYKMWCKFLGRRHSLRYPQGRQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGGDEAFLRKVITPIYRVIEKEAKKSRHGAAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFRSTFNMTQERKGVQKTSGRTGKTNFVETRSFWNIFRSFDRLWTFYLLVLQMMFIIAWEGISLLDIFQKEVLYKLSSIFITAAILRLLQSILDLALNFPGYHRWRFTDVLRSCLKVVVSLFWVIALPLFYVHSFKDAPNFMKDMLSFLHSIKGIPPLYMFAVAVYLLPNLLAAVLFLFPMLRRWIENSDWHIFRFLLWWSQIKPLVQPTKDIMSIRHVEYAWHEFFPEAQNNYGAVIALWAPVLMVYFMDTQIWYSIFSTICGGVIGAFDRLGEIRTLTMLRSRFQSLPGAFNTYLVPTDKKQKKKFSLSKRFDEISASRRSEAAKFSQLWNEVICSFREEDIISDRKGHRTKLFSYLFYPSLKTIQWPPFLLASKIPIALDMAAQFRGKDFDLWKRICADEYMKCAVIECYESFKNILHALIVGEAEMRTISVIIKEVENSIYKNTLLTNFRMGFLPSLCKKFVELVEILKDADASKQGTVVVLLQDMLEVFIRDMVVNENSELAELYHSSKDTGRQLFAGTDAKPAVLFPPVVTAQWDEQIRRLHLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLGCKKDSEIWEKDEHILQLRHWASLRGQTLSRTVRGMMYYRRAIKLQAFLDMANEKEILDGYKAVTVPSEEDRRSHRSLYASLEAVADMKFTYVATCQNYGNQKRNGDRRATDILNLMVNNPSLRVAYIDEVEEREGGRVQKVYYSVLIKAVDNLDQEIFRIKLPGPAKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGFSKASCGINLSEDIFAGFNSILRRGNITHHEYIQCGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYISSMIVVLTCYAFLYGKLYLSLSGFEAEIVKLAKRRGNEPLKAALASQSLVQIGIVMTLPMFMEIGLERGFRTAIGDLIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGIELAILLICYWIYGSAAPDSTTFGLLSWSMWFLVCSFLFSPFLFNPSGFEWQKIVEDWDDWQKWISIRGGIGVPSNKSWESWWNEEQEHLQNTGFLGRICEIILDLRFFVYQYGIVYHLNVARGDKSILVIMLANLISFYVFMSGTTQQALTYLSPMSILLTPIVSMGRKQFSADFQLMFRLVKLFLFMGAIVVLSLMFTLLSLTVGDIFASLLAFLPTAWALIQIAQACRPFVKGIGMWGSVKALARGYEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKDKKN 1922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01750 1922 Pfam Vta1 like 65 193 IPR039431 -
Vimu10g01750 1922 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 347 458 IPR026899 -
Vimu10g01750 1922 Pfam 1,3-beta-glucan synthase component 1116 1764 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vimu10g01750 1922 Pfam 1,3-beta-glucan synthase component 1025 1111 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vimu10g01750 1922 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 131 1915 - -
Vimu10g01750 1922 SMART FKS1_dom1_2 345 461 IPR026899 -
Vimu10g01750 1922 Coils Coil 1301 1321 - -
Vimu10g01750 1922 Gene3D - 50 213 IPR023175 -
Vimu10g01750 1922 FunFam callose synthase 3 51 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01750 Vimu-Chr10 24416756 24430800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01750 30 1922 Glycosyltransferase AT1G05570 58.444 0.0 2288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01750 K11000 - gmx:100777245 3422.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01750 10 24416756 24430800 Vimu11g04185 11 63420063 63436330 PCT