Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03779 ATGGACTCATCGTTTCAAGGCCCAAACAACCAAAACGACGACGTTTTCCTCGACGCTCTACCGCACTGCCCCTTCAACCATTGCCCCGCTACCCCTGATACTTCGCCGGAATCTTCCACTGAGGCTTCCATTCTTTCCGACCTCAACCCACCCTCCCCAACTCCGGCGACCACAGTCCGCCGTCGTTCGACCCGACGTCATTCTCCGGCCAGGGAGCCCAAGAAGACCGGTTCTGACGACAGTTCGTCCACCGTTCCCGGAGAAAACCTTCGGAGCGATCGAAACCTCGAAACTCCGAAAGAAAACGAGGATTCCCCCGAGAGATGCGATTCGAATCAAAAGAAACTTCGTTCCTCTCCATCTCCAAGCGTTGCCAGCGAAGAGGGGAACGAGGAATCGACGTTAACCACCGCCGAGAATGACGACAGAACCACCGATTTCGCGGACTCGGCCGTGGAATTCGGTAATTCCCCTATTAACTTGCTCGATTATATAACTGGGTTGGTTATTAGAGCAATTGTGTTTCAAATCAATGCTTTTTTTGTGTTACTGAAATGCCCAGTGTGGCTTACGGTACACGCTTTCATGTTTTTTATGGACCCTTTTGGAGCAATTAGAAAGGGGAAAGGTTTGTTGGTGGATATTTTGGGTAGAGTGTTGTGTGGTGTTTGTGGGTGCATTGGTTCTTCAGCTCAGGAGTGGTTAAAAGAGCACAAGTCTTTGTGGAATGTTGCATTTAGGTGTGGATGGGGATTGTTGTGGTCGGTTTATGTTTGTTGCATTTTGTTTGCTCTTTTCGTTTGTTCTCTTGTGGTGAGTGGGTTTTTGGTGAATAGTGTGGTGGAGAAGCCTTTTCAGATGAGTCAGGGTTTTAACTTTGATTACACCAAGCAGAGTCCTTTTGCATTGGTGCCTGTGATGTCTTGTGATAATGTTAGGAGCGGGCATGATTCTGGAACGAACGTTGCTGTTGGAAATCGGATGGGTAGAAGGGTTATACCTGCTAATCAGAAGGTGCAGGTCGCTGTTTCATTAGTGGTGCCAGAGTCAGAATACAACACAAACCTTGGCATCTTTCAGAAGAAATGTGCCTACCGGTTGCTAGTGTTTTATGAATTAGTTTCTTTGAACAAGTTCAATAGCTTGTACTGTGGCTGTATAGATCGGTGCTGCTCTTGCTCATCAAAAGATTTTTCAGCCATTCAACTTACGTGGGTAGAGAATTATCAGCACAATCCTCTTCTGCGATATATGCCAAGTGTGATCAAGGTAGACTTCTTGTCCTTTGATGGCAAAACAATTTGGACTGGGACCCAACCTTGCATGTTAAAATTCATAAGCGAGCCTATCCGGCTAATGATGACATTCCTCAAGATTGTACCACTTGTCACTGGTTTTATATCAGAGACCCAGACACTGAATGTCAAGCTGAGAGGTTTCGTTGAAGGAAAGGTACCTACTTCATGCTTGAAAGTAACACTAGAACATCGAGCAGAATATCCACCTGGTGCTGGTATTCCTCAAATATATGATTCATCAGTTATTATTGAATCAGAACTTCCCTTAATCAAGAGAATCTTATGGCGTTGGAAGCTGGGCATATTTGTATGGATCGCAATGATGGCTTTCATGATGGAGTTACTATTTGTTTTGGTGTGTTGCTTGCCTATAATTATTCCAAGAACCAGGCAAGGTAGTGGTTCTGCTCCTGTTACTGGTAATTAA 1725 0.4528 MDSSFQGPNNQNDDVFLDALPHCPFNHCPATPDTSPESSTEASILSDLNPPSPTPATTVRRRSTRRHSPAREPKKTGSDDSSSTVPGENLRSDRNLETPKENEDSPERCDSNQKKLRSSPSPSVASEEGNEESTLTTAENDDRTTDFADSAVEFGNSPINLLDYITGLVIRAIVFQINAFFVLLKCPVWLTVHAFMFFMDPFGAIRKGKGLLVDILGRVLCGVCGCIGSSAQEWLKEHKSLWNVAFRCGWGLLWSVYVCCILFALFVCSLVVSGFLVNSVVEKPFQMSQGFNFDYTKQSPFALVPVMSCDNVRSGHDSGTNVAVGNRMGRRVIPANQKVQVAVSLVVPESEYNTNLGIFQKKCAYRLLVFYELVSLNKFNSLYCGCIDRCCSCSSKDFSAIQLTWVENYQHNPLLRYMPSVIKVDFLSFDGKTIWTGTQPCMLKFISEPIRLMMTFLKIVPLVTGFISETQTLNVKLRGFVEGKVPTSCLKVTLEHRAEYPPGAGIPQIYDSSVIIESELPLIKRILWRWKLGIFVWIAMMAFMMELLFVLVCCLPIIIPRTRQGSGSAPVTGN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03779 574 MobiDBLite consensus disorder prediction 93 114 - -
Vimu11g03779 574 MobiDBLite consensus disorder prediction 115 133 - -
Vimu11g03779 574 MobiDBLite consensus disorder prediction 1 142 - -
Vimu11g03779 574 Pfam Putative adipose-regulatory protein (Seipin) 264 542 IPR009617 GO:0019915
Vimu11g03779 574 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 154 566 IPR009617 GO:0019915
Vimu11g03779 574 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03779 Vimu-Chr11 59836670 59839090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03779 K19365 - gmx:100813988 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03779 11 59836670 59839090 Vimu11g03779 11 59836670 59839090 ECH
Vimu2g00833 2 5107365 5109629 Vimu11g03779 11 59836670 59839090 ECH
Vimu11g03779 11 59836670 59839090 Vimu2g00833 2 5107365 5109629 PCT