Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03276 ATGACAGATTTGACAAAGGAGAAGAAGATAGCGGAAGCAGTAGAGGTAGGACTAGGTGTTGGTGCATCAGTGGCACAAGTAGCAGAGACGGTGGCCGGAGACGGCGGCGGACAGTCGGTGGCGGTGGCCGGCGGCGGCGGACGGCCGGAAGGTGGCGGCAGGTGGCGAGCGACAAAGGGCAGTGGCGGACAGCAACACCGGACAGATGCGAGACAGAAACCCATTGAAGGGGCTGCCGGTGGCGGTGACCATGGGCCACCGGCGGCAACAAAGACAAGATACGTGGGATTAAACATGTTGATGAAGGTTGTCACTGCGGATGTTCAGGCAGTGCAGAGGCATCGGGCAACAATTCTGAAATGTATAAAGGATTCTGATGTTTCAATTCGGAGAAGAGCCCTTGAACTTGTTTGTATTCTGGTGAATGAAACTAATGTGAAGGCCTTAACAAAGGAGCTAGTAGACTATCTGGAAGTCAGTGATCCAGATTTCAGGGTTTTATCATTGTTGATTATTATTATTATTAGAAACATCATAAACTTTTTTTCTGGGTATTCCTCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGGAACTATGTGAAAGATGAAGTATGGCATGCCTTAATTGTTGTGATAAGTAATGCTTCTGAACTTCATGGATATACAGTAAGAGCATTGTACAAGGCATTTCAGAGGTCAGCTGAACAGGAAACTCTTGTTCGCGTTGCAGTGTGGTGCATTGGAGAGTATGGTGAATTCTTAATCAACAATGATGGAATGCTTGATGTAGAAGATCCCATAACGGTGAGAGGTTCCGATGACCCTGTTTATCTTTGGAGGCTAGTGGGCTTCACCGGAGCAAGGCGCATGTGTGTAACGATGTGTGACAACTCTGATGAAGATGCAACTTTCGGCATTGTGATCACTGGCGTGGGGCATAACTTTTTGGCCCATCACTAG 981 0.4781 MTDLTKEKKIAEAVEVGLGVGASVAQVAETVAGDGGGQSVAVAGGGGRPEGGGRWRATKGSGGQQHRTDARQKPIEGAAGGGDHGPPAATKTRYVGLNMLMKVVTADVQAVQRHRATILKCIKDSDVSIRRRALELVCILVNETNVKALTKELVDYLEVSDPDFRVLSLLIIIIIRNIINFFSGYSSEKIWYIDQMLKVLSEAGNYVKDEVWHALIVVISNASELHGYTVRALYKAFQRSAEQETLVRVAVWCIGEYGEFLINNDGMLDVEDPITVRGSDDPVYLWRLVGFTGARRMCVTMCDNSDEDATFGIVITGVGHNFLAHH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03276 326 Pfam Adaptin N terminal region 92 263 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vimu11g03276 326 MobiDBLite consensus disorder prediction 35 88 - -
Vimu11g03276 326 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 92 264 - -
Vimu11g03276 326 Gene3D - 88 316 IPR011989 -
Vimu11g03276 326 SUPERFAMILY ARM repeat 91 269 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03276 Vimu-Chr11 52980320 52983351 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03276 K12391 - gmx:100817075 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03741 7 32836625 32849636 Vimu11g03276 11 52980320 52983351 PCT