Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03179 ATGTCAAGTTGCCGCAATTTGAAGAACGCTGTGATAGCATTTTTGGTTCCACTTCCATCCATCTTCTTCTACCTCTCATTTCTCAACCACTACGACTCACCAAATTCTTCATCACCTTGGTCAAGTTTGTGGTCATGGTGCTATTACCACCCTCTTGTATTAGCCAACACTCTCTTCTTCCTCAACGTCAATGTTCTCTTCTGGGTCATTGGCGTAATCCAGTCCAGCCACTGGATGATTGACCCCTATTGGACTGTGATACCTGTGATGCTTGTTCATTACTATGCCACTCACCCTTTGGCTAATTATGATTTGTGGAGGTCGAGGATCGTGGTTTTATTGACTTGGGTGTGGAGTGTGAGGCTCACTCATAACTATTTCAGGAGAGAAGGGTGGCAATGGGGTGCCAGAGAAGACTGGCGTTTCACTGAGATGAGTGAACAGTACGGAAAGCAATGGTGGTGGATTTCATTCTTTGCAGTCTATGTCTCCCAACAGATGTTTTTGATTGCATTGTCCCTTCCCTTGTATGCGGTCCATACTGTCAATCAGCCATTGAGCATGTGGGACTTGGTAGCTACAGCTGTCTGTTTATGTGGCATTGTGATAGCATACTTTTCTGATACACAGCTCTATGAGTTTGTGAATAGAAACAACAAGCTGAAGGAGCTCGGTAAACCTGTGGCTCCTGTTCTTGACAGTGGCTTGTGGTATTACTGCCGGCATCCGAATTACTTTGGTGAGCAGCTGTGGTGGTGGGGGCTGGCTGTATTTGCATGGAATCTGGGACTTGGGTGGACCTTTATTGGAGCTTTGGTTAATACTATGTGTTTGGCTTATGTGACTAAGCTTGTGGAGGACCGAATGTTGAAAAAAGAAAGTAGAGCAAAAGCGTTTAGACTATATCAAAAGACAACTTCTGTGTGGATACCTTGGTTCAAGTCCTCTCCTTCAGGAGTTAAAAATAAGAATGTTTGA 978 0.4448 MSSCRNLKNAVIAFLVPLPSIFFYLSFLNHYDSPNSSSPWSSLWSWCYYHPLVLANTLFFLNVNVLFWVIGVIQSSHWMIDPYWTVIPVMLVHYYATHPLANYDLWRSRIVVLLTWVWSVRLTHNYFRREGWQWGAREDWRFTEMSEQYGKQWWWISFFAVYVSQQMFLIALSLPLYAVHTVNQPLSMWDLVATAVCLCGIVIAYFSDTQLYEFVNRNNKLKELGKPVAPVLDSGLWYYCRHPNYFGEQLWWWGLAVFAWNLGLGWTFIGALVNTMCLAYVTKLVEDRMLKKESRAKAFRLYQKTTSVWIPWFKSSPSGVKNKNV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03179 325 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 193 262 IPR001104 GO:0006629|GO:0016627
Vimu11g03179 325 Pfam Protein of unknown function (DUF1295) 67 306 IPR010721 -
Vimu11g03179 325 Gene3D - 105 313 - -
Vimu11g03179 325 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 13 313 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03179 Vimu-Chr11 51157840 51159690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03179 - - gmx:100786065 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03179 11 51157840 51159690 Vimu11g03179 11 51157840 51159690 ECH
Vimu10g00054 10 337943 339924 Vimu11g03179 11 51157840 51159690 PCT